Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CPNE9Q8IYJ1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 AC103834.1-201ENST00000520383 144 ntBASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 MIR4508-201ENST00000584178 70 ntBASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CPNE9Q8IYJ1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.7■■□□□ 1.23
CPNE9Q8IYJ1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 THA1P-201ENST00000590384 1145 ntBASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CPNE9Q8IYJ1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 KRT18P24-201ENST00000344739 1156 ntBASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CPNE9Q8IYJ1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.68■■□□□ 1.22
CPNE9Q8IYJ1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPNE9Q8IYJ1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CPNE9Q8IYJ1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CPNE9Q8IYJ1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPNE9Q8IYJ1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CPNE9Q8IYJ1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CPNE9Q8IYJ1 MIR4281-201ENST00000580852 62 ntBASIC22.67■■□□□ 1.22
CPNE9Q8IYJ1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
CPNE9Q8IYJ1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CPNE9Q8IYJ1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 YBX1P4-201ENST00000392794 808 ntBASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CPNE9Q8IYJ1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPNE9Q8IYJ1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPNE9Q8IYJ1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CPNE9Q8IYJ1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPNE9Q8IYJ1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPNE9Q8IYJ1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CPNE9Q8IYJ1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.64■■□□□ 1.21
CPNE9Q8IYJ1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CPNE9Q8IYJ1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 AC131274.2-201ENST00000580697 1507 ntBASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 AC103724.3-201ENST00000564481 992 ntBASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 AL022069.1-201ENST00000568025 1636 ntBASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CPNE9Q8IYJ1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CPNE9Q8IYJ1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms