Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LINC00346Q8IVM7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LINC00346Q8IVM7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 TSPY13P-201ENST00000338964 914 ntBASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 AC019171.1-201ENST00000601251 1056 ntBASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00346Q8IVM7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 AC010980.1-201ENST00000587192 1142 ntBASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 AC011551.1-201ENST00000614101 683 ntBASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 PVT1_1.1-201ENST00000615125 194 ntBASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00346Q8IVM7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00346Q8IVM7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.27■□□□□ 0.83
LINC00346Q8IVM7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00346Q8IVM7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00346Q8IVM7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00346Q8IVM7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00346Q8IVM7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00346Q8IVM7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 AC022616.5-201ENST00000518796 181 ntBASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC00346Q8IVM7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 AL033527.3-201ENST00000566366 1196 ntBASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 AC012354.3-201ENST00000623734 483 ntBASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
LINC00346Q8IVM7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 AC120024.1-201ENST00000562672 995 ntBASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINC00346Q8IVM7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms