Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD2Q8IV50 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LYSMD2Q8IV50 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD2Q8IV50 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.18■□□□□ 0.82
LYSMD2Q8IV50 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD2Q8IV50 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD2Q8IV50 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD2Q8IV50 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LYSMD2Q8IV50 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LYSMD2Q8IV50 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD2Q8IV50 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD2Q8IV50 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD2Q8IV50 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LYSMD2Q8IV50 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 AP006261.1-201ENST00000584783 668 ntBASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD2Q8IV50 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 AC073130.3-201ENST00000624389 2278 ntBASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD2Q8IV50 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LYSMD2Q8IV50 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LYSMD2Q8IV50 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LYSMD2Q8IV50 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LYSMD2Q8IV50 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
LYSMD2Q8IV50 ANOS2P-203ENST00000472227 1816 ntBASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 AC021231.2-201ENST00000594613 730 ntBASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 MIR6089-201ENST00000616698 64 ntBASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LYSMD2Q8IV50 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD2Q8IV50 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD2Q8IV50 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 AL359504.2-201ENST00000605506 1601 ntBASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LYSMD2Q8IV50 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms