Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SFR1Q86XK3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.46■■□□□ 1.67
SFR1Q86XK3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.46■■□□□ 1.67
SFR1Q86XK3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.45■■□□□ 1.66
SFR1Q86XK3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SFR1Q86XK3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.45■■□□□ 1.66
SFR1Q86XK3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SFR1Q86XK3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
SFR1Q86XK3 ABCB10P4-201ENST00000566803 2184 ntBASIC25.45■■□□□ 1.66
SFR1Q86XK3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SFR1Q86XK3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SFR1Q86XK3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.44■■□□□ 1.66
SFR1Q86XK3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.44■■□□□ 1.66
SFR1Q86XK3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.44■■□□□ 1.66
SFR1Q86XK3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SFR1Q86XK3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SFR1Q86XK3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SFR1Q86XK3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SFR1Q86XK3 BX664725.1-201ENST00000438252 379 ntBASIC25.43■■□□□ 1.66
SFR1Q86XK3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.43■■□□□ 1.66
SFR1Q86XK3 AL161729.1-201ENST00000604104 1402 ntBASIC25.43■■□□□ 1.66
SFR1Q86XK3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.43■■□□□ 1.66
SFR1Q86XK3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SFR1Q86XK3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SFR1Q86XK3 AC021242.3-201ENST00000607598 1377 ntBASIC25.42■■□□□ 1.66
SFR1Q86XK3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SFR1Q86XK3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SFR1Q86XK3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.41■■□□□ 1.66
SFR1Q86XK3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.41■■□□□ 1.66
SFR1Q86XK3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.41■■□□□ 1.66
SFR1Q86XK3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SFR1Q86XK3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.4■■□□□ 1.66
SFR1Q86XK3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.4■■□□□ 1.66
SFR1Q86XK3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFR1Q86XK3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.4■■□□□ 1.66
SFR1Q86XK3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.4■■□□□ 1.66
SFR1Q86XK3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SFR1Q86XK3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
SFR1Q86XK3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFR1Q86XK3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SFR1Q86XK3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SFR1Q86XK3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
SFR1Q86XK3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SFR1Q86XK3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SFR1Q86XK3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
SFR1Q86XK3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
SFR1Q86XK3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SFR1Q86XK3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.39■■□□□ 1.66
SFR1Q86XK3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SFR1Q86XK3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SFR1Q86XK3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.39■■□□□ 1.65
SFR1Q86XK3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SFR1Q86XK3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SFR1Q86XK3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.39■■□□□ 1.65
SFR1Q86XK3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.38■■□□□ 1.65
SFR1Q86XK3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.38■■□□□ 1.65
SFR1Q86XK3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
SFR1Q86XK3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SFR1Q86XK3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.38■■□□□ 1.65
SFR1Q86XK3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SFR1Q86XK3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SFR1Q86XK3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SFR1Q86XK3 AC004448.1-201ENST00000458332 883 ntBASIC25.37■■□□□ 1.65
SFR1Q86XK3 SNX5-217ENST00000606557 1087 ntBASIC25.37■■□□□ 1.65
SFR1Q86XK3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.37■■□□□ 1.65
SFR1Q86XK3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SFR1Q86XK3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.37■■□□□ 1.65
SFR1Q86XK3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SFR1Q86XK3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SFR1Q86XK3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SFR1Q86XK3 AC239859.2-201ENST00000444165 318 ntBASIC25.36■■□□□ 1.65
SFR1Q86XK3 Z92544.1-202ENST00000571933 1220 ntBASIC25.36■■□□□ 1.65
SFR1Q86XK3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.36■■□□□ 1.65
SFR1Q86XK3 AL035685.1-201ENST00000636663 812 ntBASIC25.36■■□□□ 1.65
SFR1Q86XK3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SFR1Q86XK3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.35■■□□□ 1.65
SFR1Q86XK3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SFR1Q86XK3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SFR1Q86XK3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SFR1Q86XK3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.34■■□□□ 1.65
SFR1Q86XK3 KRT125P-201ENST00000546827 989 ntBASIC25.34■■□□□ 1.65
SFR1Q86XK3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SFR1Q86XK3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SFR1Q86XK3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SFR1Q86XK3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SFR1Q86XK3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms