Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.66■■□□□ 1.54
VPS36Q86VN1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS36Q86VN1 AC012354.3-201ENST00000623734 483 ntBASIC24.66■■□□□ 1.54
VPS36Q86VN1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
VPS36Q86VN1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.66■■□□□ 1.54
VPS36Q86VN1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS36Q86VN1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
VPS36Q86VN1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
VPS36Q86VN1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.65■■□□□ 1.54
VPS36Q86VN1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS36Q86VN1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS36Q86VN1 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.65■■□□□ 1.54
VPS36Q86VN1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS36Q86VN1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
VPS36Q86VN1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
VPS36Q86VN1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.65■■□□□ 1.54
VPS36Q86VN1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
VPS36Q86VN1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
VPS36Q86VN1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS36Q86VN1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
VPS36Q86VN1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
VPS36Q86VN1 LONRF2P2-201ENST00000439212 571 ntBASIC24.64■■□□□ 1.54
VPS36Q86VN1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.64■■□□□ 1.54
VPS36Q86VN1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS36Q86VN1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS36Q86VN1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
VPS36Q86VN1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
VPS36Q86VN1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.64■■□□□ 1.53
VPS36Q86VN1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS36Q86VN1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS36Q86VN1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.63■■□□□ 1.53
VPS36Q86VN1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.63■■□□□ 1.53
VPS36Q86VN1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
VPS36Q86VN1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.63■■□□□ 1.53
VPS36Q86VN1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS36Q86VN1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
VPS36Q86VN1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
VPS36Q86VN1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
VPS36Q86VN1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS36Q86VN1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.62■■□□□ 1.53
VPS36Q86VN1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS36Q86VN1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS36Q86VN1 KRT18P60-201ENST00000312876 1297 ntBASIC24.62■■□□□ 1.53
VPS36Q86VN1 AC129492.7-201ENST00000622992 756 ntBASIC24.62■■□□□ 1.53
VPS36Q86VN1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS36Q86VN1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
VPS36Q86VN1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.62■■□□□ 1.53
VPS36Q86VN1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.62■■□□□ 1.53
VPS36Q86VN1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.62■■□□□ 1.53
VPS36Q86VN1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
VPS36Q86VN1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
VPS36Q86VN1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
VPS36Q86VN1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 AC133561.1-201ENST00000568600 2415 ntBASIC24.61■■□□□ 1.53
VPS36Q86VN1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
VPS36Q86VN1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
VPS36Q86VN1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS36Q86VN1 AC068473.5-201ENST00000616428 2072 ntBASIC24.6■■□□□ 1.53
VPS36Q86VN1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS36Q86VN1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS36Q86VN1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.6■■□□□ 1.53
VPS36Q86VN1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.6■■□□□ 1.53
VPS36Q86VN1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS36Q86VN1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
VPS36Q86VN1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.6■■□□□ 1.53
VPS36Q86VN1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
VPS36Q86VN1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
VPS36Q86VN1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.59■■□□□ 1.53
VPS36Q86VN1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
VPS36Q86VN1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.59■■□□□ 1.53
VPS36Q86VN1 AC011551.1-201ENST00000614101 683 ntBASIC24.59■■□□□ 1.53
VPS36Q86VN1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.59■■□□□ 1.53
VPS36Q86VN1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.59■■□□□ 1.53
VPS36Q86VN1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
VPS36Q86VN1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
VPS36Q86VN1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.58■■□□□ 1.53
VPS36Q86VN1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
VPS36Q86VN1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
VPS36Q86VN1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.58■■□□□ 1.53
VPS36Q86VN1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.58■■□□□ 1.53
VPS36Q86VN1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
VPS36Q86VN1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
VPS36Q86VN1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
VPS36Q86VN1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.58■■□□□ 1.52
VPS36Q86VN1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
VPS36Q86VN1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
VPS36Q86VN1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS36Q86VN1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS36Q86VN1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
VPS36Q86VN1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.57■■□□□ 1.52
VPS36Q86VN1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.57■■□□□ 1.52
VPS36Q86VN1 AL033527.3-201ENST00000566366 1196 ntBASIC24.57■■□□□ 1.52
VPS36Q86VN1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
VPS36Q86VN1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
VPS36Q86VN1 AL022069.1-201ENST00000568025 1636 ntBASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms