Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHFQ7M4L6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.7■□□□□ 0.9
SHFQ7M4L6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SHFQ7M4L6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHFQ7M4L6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SHFQ7M4L6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHFQ7M4L6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHFQ7M4L6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHFQ7M4L6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SHFQ7M4L6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SHFQ7M4L6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHFQ7M4L6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SHFQ7M4L6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SHFQ7M4L6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SHFQ7M4L6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHFQ7M4L6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SHFQ7M4L6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.68■□□□□ 0.9
SHFQ7M4L6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.68■□□□□ 0.9
SHFQ7M4L6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHFQ7M4L6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHFQ7M4L6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
SHFQ7M4L6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHFQ7M4L6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHFQ7M4L6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHFQ7M4L6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHFQ7M4L6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHFQ7M4L6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHFQ7M4L6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.67■□□□□ 0.9
SHFQ7M4L6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHFQ7M4L6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.67■□□□□ 0.9
SHFQ7M4L6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
SHFQ7M4L6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHFQ7M4L6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SHFQ7M4L6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.66■□□□□ 0.9
SHFQ7M4L6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHFQ7M4L6 AC133552.2-201ENST00000619106 1032 ntBASIC20.66■□□□□ 0.9
SHFQ7M4L6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHFQ7M4L6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
SHFQ7M4L6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHFQ7M4L6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SHFQ7M4L6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHFQ7M4L6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHFQ7M4L6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHFQ7M4L6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.64■□□□□ 0.9
SHFQ7M4L6 AC009831.1-201ENST00000580420 1582 ntBASIC20.64■□□□□ 0.9
SHFQ7M4L6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHFQ7M4L6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHFQ7M4L6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHFQ7M4L6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHFQ7M4L6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHFQ7M4L6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHFQ7M4L6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHFQ7M4L6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHFQ7M4L6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHFQ7M4L6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SHFQ7M4L6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.63■□□□□ 0.89
SHFQ7M4L6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHFQ7M4L6 CLDN5-201ENST00000403084 2357 ntBASIC20.63■□□□□ 0.89
SHFQ7M4L6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SHFQ7M4L6 RNF126P1-201ENST00000567452 1320 ntBASIC20.62■□□□□ 0.89
SHFQ7M4L6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHFQ7M4L6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHFQ7M4L6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SHFQ7M4L6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.62■□□□□ 0.89
SHFQ7M4L6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHFQ7M4L6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.62■□□□□ 0.89
SHFQ7M4L6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHFQ7M4L6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHFQ7M4L6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
SHFQ7M4L6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHFQ7M4L6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.61■□□□□ 0.89
SHFQ7M4L6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHFQ7M4L6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.61■□□□□ 0.89
SHFQ7M4L6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms