Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST2H3AQ71DI3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 AC103834.1-201ENST00000520383 144 ntBASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 ABCB10P4-201ENST00000566803 2184 ntBASIC20.15■□□□□ 0.82
HIST2H3AQ71DI3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 THA1P-201ENST00000590384 1145 ntBASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST2H3AQ71DI3 AL022069.1-201ENST00000568025 1636 ntBASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 AC131274.2-201ENST00000580697 1507 ntBASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 MIR4281-201ENST00000580852 62 ntBASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST2H3AQ71DI3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST2H3AQ71DI3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST2H3AQ71DI3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST2H3AQ71DI3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HIST2H3AQ71DI3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST2H3AQ71DI3 AF131216.4-201ENST00000638924 1588 ntBASIC20.12■□□□□ 0.81
HIST2H3AQ71DI3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.11■□□□□ 0.81
HIST2H3AQ71DI3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HIST2H3AQ71DI3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HIST2H3AQ71DI3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.08■□□□□ 0.81
HIST2H3AQ71DI3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms