Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
FOXR2Q6PJQ5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXR2Q6PJQ5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
FOXR2Q6PJQ5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
FOXR2Q6PJQ5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR2Q6PJQ5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR2Q6PJQ5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR2Q6PJQ5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR2Q6PJQ5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
FOXR2Q6PJQ5 AF131216.4-201ENST00000638924 1588 ntBASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 MIR4508-201ENST00000584178 70 ntBASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXR2Q6PJQ5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
FOXR2Q6PJQ5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
FOXR2Q6PJQ5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.14■■□□□ 1.62
FOXR2Q6PJQ5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.14■■□□□ 1.62
FOXR2Q6PJQ5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
FOXR2Q6PJQ5 BHLHE23-202ENST00000612929 1109 ntBASIC25.14■■□□□ 1.62
FOXR2Q6PJQ5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
FOXR2Q6PJQ5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.14■■□□□ 1.61
FOXR2Q6PJQ5 AC012676.1-201ENST00000574705 1949 ntBASIC25.14■■□□□ 1.61
FOXR2Q6PJQ5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
FOXR2Q6PJQ5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 MIR4281-201ENST00000580852 62 ntBASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 AC012354.3-201ENST00000623734 483 ntBASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 ALDH1A3-203ENST00000557963 1670 ntBASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
FOXR2Q6PJQ5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 AC092068.2-201ENST00000590491 1708 ntBASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 THA1P-201ENST00000590384 1145 ntBASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.12■■□□□ 1.61
FOXR2Q6PJQ5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
FOXR2Q6PJQ5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 AC010980.1-201ENST00000587192 1142 ntBASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
FOXR2Q6PJQ5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
FOXR2Q6PJQ5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
FOXR2Q6PJQ5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.08■■□□□ 1.61
FOXR2Q6PJQ5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms