Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 AC245100.8-202ENST00000629247 1058 ntBASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTCRAQ6ISU1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PTCRAQ6ISU1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.1■■□□□ 1.45
PTCRAQ6ISU1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
PTCRAQ6ISU1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PTCRAQ6ISU1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PTCRAQ6ISU1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PTCRAQ6ISU1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 AC241377.3-202ENST00000626088 1088 ntBASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 AC241585.3-202ENST00000628937 1088 ntBASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 AC009102.2-201ENST00000606772 1639 ntBASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PTCRAQ6ISU1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 AC126544.1-201ENST00000580842 1059 ntBASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTCRAQ6ISU1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.06■■□□□ 1.44
PTCRAQ6ISU1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PTCRAQ6ISU1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 AC123595.1-201ENST00000440769 1046 ntBASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTCRAQ6ISU1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTCRAQ6ISU1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTCRAQ6ISU1 AC027612.3-201ENST00000413684 1047 ntBASIC24.04■■□□□ 1.44
PTCRAQ6ISU1 AC006455.2-201ENST00000429931 906 ntBASIC24.04■■□□□ 1.44
PTCRAQ6ISU1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.04■■□□□ 1.44
PTCRAQ6ISU1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.04■■□□□ 1.44
PTCRAQ6ISU1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTCRAQ6ISU1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTCRAQ6ISU1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PTCRAQ6ISU1 ESRRAP2-201ENST00000418437 1549 ntBASIC24.03■■□□□ 1.44
PTCRAQ6ISU1 TSPY26P-201ENST00000476365 1326 ntBASIC24.03■■□□□ 1.44
PTCRAQ6ISU1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.02■■□□□ 1.44
PTCRAQ6ISU1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCRAQ6ISU1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.02■■□□□ 1.44
PTCRAQ6ISU1 AL358852.1-201ENST00000623174 1268 ntBASIC24.02■■□□□ 1.44
PTCRAQ6ISU1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTCRAQ6ISU1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 C17orf82-201ENST00000623772 1530 ntBASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 MIR3181-201ENST00000578512 73 ntBASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 NTF6G-201ENST00000591094 616 ntBASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PTCRAQ6ISU1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24■■□□□ 1.43
PTCRAQ6ISU1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24■■□□□ 1.43
PTCRAQ6ISU1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
PTCRAQ6ISU1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PTCRAQ6ISU1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTCRAQ6ISU1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24■■□□□ 1.43
PTCRAQ6ISU1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PTCRAQ6ISU1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PTCRAQ6ISU1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PTCRAQ6ISU1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PTCRAQ6ISU1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 AC009086.3-201ENST00000623486 1008 ntBASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PTCRAQ6ISU1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTCRAQ6ISU1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms