Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL6Q6ICC9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL6Q6ICC9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL6Q6ICC9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL6Q6ICC9 AC096631.2-201ENST00000436136 790 ntBASIC20.71■□□□□ 0.91
RTL6Q6ICC9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL6Q6ICC9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL6Q6ICC9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL6Q6ICC9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL6Q6ICC9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.69■□□□□ 0.9
RTL6Q6ICC9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 AC004448.1-201ENST00000458332 883 ntBASIC20.68■□□□□ 0.9
RTL6Q6ICC9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.68■□□□□ 0.9
RTL6Q6ICC9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 SLC6A10P-202ENST00000431994 2058 ntBASIC20.67■□□□□ 0.9
RTL6Q6ICC9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 MIR935-201ENST00000401179 91 ntBASIC20.67■□□□□ 0.9
RTL6Q6ICC9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RTL6Q6ICC9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.66■□□□□ 0.9
RTL6Q6ICC9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL6Q6ICC9 AC093323.1-202ENST00000635031 2045 ntBASIC20.65■□□□□ 0.9
RTL6Q6ICC9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL6Q6ICC9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL6Q6ICC9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL6Q6ICC9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.65■□□□□ 0.9
RTL6Q6ICC9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL6Q6ICC9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL6Q6ICC9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RTL6Q6ICC9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
RTL6Q6ICC9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.64■□□□□ 0.89
RTL6Q6ICC9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL6Q6ICC9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.64■□□□□ 0.89
RTL6Q6ICC9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL6Q6ICC9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL6Q6ICC9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.63■□□□□ 0.89
RTL6Q6ICC9 AC005837.3-201ENST00000612163 286 ntBASIC20.63■□□□□ 0.89
RTL6Q6ICC9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTL6Q6ICC9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL6Q6ICC9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTL6Q6ICC9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RTL6Q6ICC9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.62■□□□□ 0.89
RTL6Q6ICC9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTL6Q6ICC9 AC142381.3-201ENST00000568208 1670 ntBASIC20.62■□□□□ 0.89
RTL6Q6ICC9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL6Q6ICC9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.62■□□□□ 0.89
RTL6Q6ICC9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL6Q6ICC9 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTL6Q6ICC9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL6Q6ICC9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTL6Q6ICC9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RTL6Q6ICC9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTL6Q6ICC9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms