Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.39■■□□□ 1.01
HLA-DQA1Q5Y7H0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DQA1Q5Y7H0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA1Q5Y7H0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DQA1Q5Y7H0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.38■■□□□ 1.01
HLA-DQA1Q5Y7H0 AC135731.1-201ENST00000569415 2548 ntBASIC21.38■■□□□ 1.01
HLA-DQA1Q5Y7H0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HLA-DQA1Q5Y7H0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 AC092028.1-203ENST00000608262 953 ntBASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 AL161729.1-201ENST00000604104 1402 ntBASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HLA-DQA1Q5Y7H0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 LINC01124-201ENST00000409786 2117 ntBASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 TSPY9P-201ENST00000440215 945 ntBASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 TSPY11P-201ENST00000442607 1045 ntBASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 AL139125.2-201ENST00000623134 1869 ntBASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HLA-DQA1Q5Y7H0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.35■■□□□ 1.01
HLA-DQA1Q5Y7H0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.34■■□□□ 1.01
HLA-DQA1Q5Y7H0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.34■■□□□ 1.01
HLA-DQA1Q5Y7H0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.34■■□□□ 1.01
HLA-DQA1Q5Y7H0 AC141586.4-201ENST00000624558 1573 ntBASIC21.34■■□□□ 1.01
HLA-DQA1Q5Y7H0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HLA-DQA1Q5Y7H0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
HLA-DQA1Q5Y7H0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 GUSBP5-201ENST00000418136 578 ntBASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 MTDHP2-201ENST00000601468 714 ntBASIC21.33■■□□□ 1.01
HLA-DQA1Q5Y7H0 AC131274.2-201ENST00000580697 1507 ntBASIC21.33■■□□□ 1
HLA-DQA1Q5Y7H0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HLA-DQA1Q5Y7H0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HLA-DQA1Q5Y7H0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 AC004448.1-201ENST00000458332 883 ntBASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HLA-DQA1Q5Y7H0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 SNX5-217ENST00000606557 1087 ntBASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HLA-DQA1Q5Y7H0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HLA-DQA1Q5Y7H0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms