Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FAM27BQ5VT28 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM27BQ5VT28 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
FAM27BQ5VT28 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM27BQ5VT28 RARRES2P1-201ENST00000474487 481 ntBASIC20.14■□□□□ 0.81
FAM27BQ5VT28 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
FAM27BQ5VT28 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.12■□□□□ 0.81
FAM27BQ5VT28 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 AC004448.1-201ENST00000458332 883 ntBASIC20.11■□□□□ 0.81
FAM27BQ5VT28 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.11■□□□□ 0.81
FAM27BQ5VT28 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.1■□□□□ 0.81
FAM27BQ5VT28 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FAM27BQ5VT28 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.08■□□□□ 0.81
FAM27BQ5VT28 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
FAM27BQ5VT28 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FAM27BQ5VT28 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.08■□□□□ 0.81
FAM27BQ5VT28 BX664725.1-201ENST00000438252 379 ntBASIC20.08■□□□□ 0.81
FAM27BQ5VT28 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.08■□□□□ 0.81
FAM27BQ5VT28 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FAM27BQ5VT28 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FAM27BQ5VT28 AC021242.3-201ENST00000607598 1377 ntBASIC20.08■□□□□ 0.8
FAM27BQ5VT28 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 ALDH1A3-203ENST00000557963 1670 ntBASIC20.07■□□□□ 0.8
FAM27BQ5VT28 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FAM27BQ5VT28 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms