Protein–RNA interactions for Protein: Q5SGD2

PPM1L, Protein phosphatase 1L, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1LQ5SGD2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1LQ5SGD2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.34■■□□□ 1.49
PPM1LQ5SGD2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1LQ5SGD2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1LQ5SGD2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1LQ5SGD2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 ZNRF2P3-201ENST00000424200 374 ntBASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 AC024257.2-201ENST00000549699 147 ntBASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1LQ5SGD2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1LQ5SGD2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PPM1LQ5SGD2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1LQ5SGD2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1LQ5SGD2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1LQ5SGD2 AL031432.3-201ENST00000607698 485 ntBASIC24.3■■□□□ 1.48
PPM1LQ5SGD2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.3■■□□□ 1.48
PPM1LQ5SGD2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 EDA-201ENST00000338901 1233 ntBASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 SUDS3P1-201ENST00000505831 966 ntBASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPM1LQ5SGD2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 DUX4L19-201ENST00000557448 1267 ntBASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 AL355001.2-201ENST00000620617 1191 ntBASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1LQ5SGD2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 AC131274.2-201ENST00000580697 1507 ntBASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PPM1LQ5SGD2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1LQ5SGD2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.26■■□□□ 1.47
PPM1LQ5SGD2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.26■■□□□ 1.47
PPM1LQ5SGD2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PPM1LQ5SGD2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1LQ5SGD2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1LQ5SGD2 SLC6A10P-202ENST00000431994 2058 ntBASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1LQ5SGD2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PPM1LQ5SGD2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPM1LQ5SGD2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
PPM1LQ5SGD2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPM1LQ5SGD2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PPM1LQ5SGD2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.24■■□□□ 1.47
PPM1LQ5SGD2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms