Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC01554Q52M75 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
LINC01554Q52M75 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
LINC01554Q52M75 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 CEBPA-AS1-201ENST00000592982 2198 ntBASIC11.49□□□□□ -0.57
LINC01554Q52M75 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 AC127502.1-201ENST00000399971 1502 ntBASIC11.49□□□□□ -0.57
LINC01554Q52M75 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC01554Q52M75 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
LINC01554Q52M75 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC01554Q52M75 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC01554Q52M75 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC01554Q52M75 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
LINC01554Q52M75 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
LINC01554Q52M75 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
LINC01554Q52M75 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
LINC01554Q52M75 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC11.48□□□□□ -0.57
LINC01554Q52M75 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
LINC01554Q52M75 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 PODN-203ENST00000395871 2744 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
LINC01554Q52M75 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC01554Q52M75 AC026471.1-201ENST00000564629 3026 ntBASIC11.46□□□□□ -0.57
LINC01554Q52M75 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01554Q52M75 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01554Q52M75 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01554Q52M75 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
LINC01554Q52M75 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC01554Q52M75 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC01554Q52M75 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC11.46□□□□□ -0.58
LINC01554Q52M75 AC100797.4-201ENST00000631653 1827 ntBASIC11.46□□□□□ -0.58
LINC01554Q52M75 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01554Q52M75 LINC01003-201ENST00000564834 1764 ntBASIC11.46□□□□□ -0.58
LINC01554Q52M75 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LINC01554Q52M75 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01554Q52M75 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
LINC01554Q52M75 PROC-203ENST00000409048 1586 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 NFIC-211ENST00000641145 8399 ntBASIC11.45□□□□□ -0.58
LINC01554Q52M75 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 EBPL-202ENST00000378268 680 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LINC01554Q52M75 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01554Q52M75 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms