Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SNAI3Q3KNW1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 MIR4281-201ENST00000580852 62 ntBASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SNAI3Q3KNW1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 AC131274.2-201ENST00000580697 1507 ntBASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 AL022069.1-201ENST00000568025 1636 ntBASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SNAI3Q3KNW1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 AL161729.1-201ENST00000604104 1402 ntBASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 AF131216.4-201ENST00000638924 1588 ntBASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAI3Q3KNW1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNAI3Q3KNW1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNAI3Q3KNW1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 AC103724.3-201ENST00000564481 992 ntBASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.89■□□□□ 0.77
SNAI3Q3KNW1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 YBX1P4-201ENST00000392794 808 ntBASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAI3Q3KNW1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAI3Q3KNW1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNAI3Q3KNW1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms