Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.65■□□□□ 0.74
EFNB3Q15768 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB3Q15768 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB3Q15768 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB3Q15768 AC005703.6-201ENST00000623265 1329 ntBASIC19.65■□□□□ 0.74
EFNB3Q15768 AL161729.1-201ENST00000604104 1402 ntBASIC19.65■□□□□ 0.74
EFNB3Q15768 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.65■□□□□ 0.74
EFNB3Q15768 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
EFNB3Q15768 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB3Q15768 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EFNB3Q15768 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
EFNB3Q15768 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.64■□□□□ 0.73
EFNB3Q15768 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB3Q15768 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.64■□□□□ 0.73
EFNB3Q15768 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB3Q15768 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB3Q15768 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EFNB3Q15768 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
EFNB3Q15768 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB3Q15768 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB3Q15768 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB3Q15768 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB3Q15768 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
EFNB3Q15768 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB3Q15768 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
EFNB3Q15768 MIR4466-201ENST00000606121 54 ntBASIC19.63■□□□□ 0.73
EFNB3Q15768 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
EFNB3Q15768 AC020928.2-201ENST00000588717 2197 ntBASIC19.63■□□□□ 0.73
EFNB3Q15768 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EFNB3Q15768 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.62■□□□□ 0.73
EFNB3Q15768 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.62■□□□□ 0.73
EFNB3Q15768 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.62■□□□□ 0.73
EFNB3Q15768 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EFNB3Q15768 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFNB3Q15768 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNB3Q15768 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB3Q15768 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.61■□□□□ 0.73
EFNB3Q15768 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.61■□□□□ 0.73
EFNB3Q15768 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.61■□□□□ 0.73
EFNB3Q15768 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
EFNB3Q15768 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.61■□□□□ 0.73
EFNB3Q15768 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.61■□□□□ 0.73
EFNB3Q15768 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB3Q15768 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFNB3Q15768 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
EFNB3Q15768 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB3Q15768 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
EFNB3Q15768 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFNB3Q15768 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.6■□□□□ 0.73
EFNB3Q15768 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
EFNB3Q15768 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
EFNB3Q15768 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNB3Q15768 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNB3Q15768 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNB3Q15768 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.59■□□□□ 0.73
EFNB3Q15768 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
EFNB3Q15768 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.59■□□□□ 0.73
EFNB3Q15768 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
EFNB3Q15768 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB3Q15768 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB3Q15768 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB3Q15768 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB3Q15768 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EFNB3Q15768 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFNB3Q15768 AP003733.4-201ENST00000623785 1697 ntBASIC19.59■□□□□ 0.73
EFNB3Q15768 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.58■□□□□ 0.73
EFNB3Q15768 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNB3Q15768 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNB3Q15768 HLA-L-211ENST00000482052 1765 ntBASIC19.58■□□□□ 0.73
EFNB3Q15768 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
EFNB3Q15768 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFNB3Q15768 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.58■□□□□ 0.72
EFNB3Q15768 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFNB3Q15768 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFNB3Q15768 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EFNB3Q15768 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFNB3Q15768 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EFNB3Q15768 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EFNB3Q15768 AC022211.4-201ENST00000625094 2161 ntBASIC19.57■□□□□ 0.72
EFNB3Q15768 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFNB3Q15768 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
EFNB3Q15768 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.57■□□□□ 0.72
EFNB3Q15768 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFNB3Q15768 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFNB3Q15768 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFNB3Q15768 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.56■□□□□ 0.72
EFNB3Q15768 AL139246.5-201ENST00000606645 996 ntBASIC19.56■□□□□ 0.72
EFNB3Q15768 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFNB3Q15768 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFNB3Q15768 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFNB3Q15768 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms