Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 BGL2YGR282C 942 nt5.35□□□□□ -1.55
RPA49Q01080 tR(ACG)JtR(ACG)J 73 nt5.35□□□□□ -1.55
RPA49Q01080 SPL2YHR136C 447 nt5.35□□□□□ -1.55
RPA49Q01080 YKL107WYKL107W 930 nt5.35□□□□□ -1.55
RPA49Q01080 ERG7YHR072W 2196 nt5.35□□□□□ -1.55
RPA49Q01080 YDR132CYDR132C 1488 nt5.34□□□□□ -1.55
RPA49Q01080 SLT2YHR030C 1455 nt5.34□□□□□ -1.55
RPA49Q01080 TUB2YFL037W 1374 nt5.34□□□□□ -1.55
RPA49Q01080 TUL1YKL034W 2277 nt5.34□□□□□ -1.55
RPA49Q01080 VAM7YGL212W 951 nt5.34□□□□□ -1.55
RPA49Q01080 MRPL25YGR076C 474 nt5.34□□□□□ -1.55
RPA49Q01080 NSG1YHR133C 876 nt5.34□□□□□ -1.55
RPA49Q01080 MAC1YMR021C 1254 nt5.34□□□□□ -1.55
RPA49Q01080 TOM40YMR203W 1164 nt5.34□□□□□ -1.55
RPA49Q01080 CKB2YOR039W 777 nt5.34□□□□□ -1.55
RPA49Q01080 RPL3YOR063W 1164 nt5.34□□□□□ -1.55
RPA49Q01080 FUI1YBL042C 1920 nt5.34□□□□□ -1.55
RPA49Q01080 IML2YJL082W 2196 nt5.33□□□□□ -1.56
RPA49Q01080 CUE2YKL090W 1332 nt5.33□□□□□ -1.56
RPA49Q01080 YOR1YGR281W 4434 nt5.33□□□□□ -1.56
RPA49Q01080 PUS6YGR169C 1215 nt5.33□□□□□ -1.56
RPA49Q01080 MID2YLR332W 1131 nt5.33□□□□□ -1.56
RPA49Q01080 YOL035CYOL035C 303 nt5.33□□□□□ -1.56
RPA49Q01080 DBP9YLR276C 1785 nt5.33□□□□□ -1.56
RPA49Q01080 BIT2YBR270C 1638 nt5.33□□□□□ -1.56
RPA49Q01080 GLT1YDL171C 6438 nt5.33□□□□□ -1.56
RPA49Q01080 RNR3YIL066C 2610 nt5.32□□□□□ -1.56
RPA49Q01080 FLC3YGL139W 2409 nt5.32□□□□□ -1.56
RPA49Q01080 HOF1YMR032W 2010 nt5.32□□□□□ -1.56
RPA49Q01080 MF(ALPHA)2YGL089C 363 nt5.32□□□□□ -1.56
RPA49Q01080 PDE1YGL248W 1110 nt5.32□□□□□ -1.56
RPA49Q01080 CTR3YLR411W 726 nt5.32□□□□□ -1.56
RPA49Q01080 SPG4YMR107W 348 nt5.32□□□□□ -1.56
RPA49Q01080 CTS2YDR371W 1536 nt5.32□□□□□ -1.56
RPA49Q01080 ARB1YER036C 1833 nt5.32□□□□□ -1.56
RPA49Q01080 NRD1YNL251C 1728 nt5.31□□□□□ -1.56
RPA49Q01080 NGR1YBR212W 2019 nt5.31□□□□□ -1.56
RPA49Q01080 PDI1YCL043C 1569 nt5.31□□□□□ -1.56
RPA49Q01080 REG2YBR050C 1017 nt5.31□□□□□ -1.56
RPA49Q01080 MRI1YPR118W 1236 nt5.31□□□□□ -1.56
RPA49Q01080 CLA4YNL298W 2529 nt5.3□□□□□ -1.56
RPA49Q01080 PCL6YER059W 1263 nt5.3□□□□□ -1.56
RPA49Q01080 FAU1YER183C 636 nt5.3□□□□□ -1.56
RPA49Q01080 SPO12YHR152W 522 nt5.3□□□□□ -1.56
RPA49Q01080 RPB4YJL140W 666 nt5.3□□□□□ -1.56
RPA49Q01080 AAD6YFL056C 639 nt5.29□□□□□ -1.56
RPA49Q01080 RPC19YNL113W 429 nt5.29□□□□□ -1.56
RPA49Q01080 CAM1YPL048W 1248 nt5.29□□□□□ -1.56
RPA49Q01080 MUM3YOR298W 1440 nt5.29□□□□□ -1.56
RPA49Q01080 GDB1YPR184W 4611 nt5.29□□□□□ -1.56
RPA49Q01080 HES1YOR237W 1305 nt5.28□□□□□ -1.56
RPA49Q01080 GCR2YNL199C 1605 nt5.28□□□□□ -1.56
RPA49Q01080 RPL12AYEL054C 498 nt5.28□□□□□ -1.56
RPA49Q01080 SKI6YGR195W 741 nt5.28□□□□□ -1.56
RPA49Q01080 YAL044W-AYAL044W-A 333 nt5.28□□□□□ -1.56
RPA49Q01080 SRN2YLR119W 642 nt5.28□□□□□ -1.56
RPA49Q01080 YOR292CYOR292C 930 nt5.28□□□□□ -1.56
RPA49Q01080 RRP45YDR280W 918 nt5.27□□□□□ -1.57
RPA49Q01080 MRF1YGL143C 1242 nt5.27□□□□□ -1.57
RPA49Q01080 YAL056C-AYAL056C-A 351 nt5.27□□□□□ -1.57
RPA49Q01080 GTR1YML121W 933 nt5.27□□□□□ -1.57
RPA49Q01080 ETT1YOR051C 1239 nt5.27□□□□□ -1.57
RPA49Q01080 VBA1YMR088C 1689 nt5.27□□□□□ -1.57
RPA49Q01080 GIP1YBR045C 1920 nt5.27□□□□□ -1.57
RPA49Q01080 OXP1YKL215C 3861 nt5.26□□□□□ -1.57
RPA49Q01080 THI5YFL058W 1023 nt5.26□□□□□ -1.57
RPA49Q01080 ARO2YGL148W 1131 nt5.26□□□□□ -1.57
RPA49Q01080 CTR2YHR175W 570 nt5.26□□□□□ -1.57
RPA49Q01080 THI12YNL332W 1023 nt5.26□□□□□ -1.57
RPA49Q01080 SFT2YBL102W 648 nt5.26□□□□□ -1.57
RPA49Q01080 YPL014WYPL014W 1146 nt5.26□□□□□ -1.57
RPA49Q01080 BRE2YLR015W 1518 nt5.26□□□□□ -1.57
RPA49Q01080 YIR007WYIR007W 2295 nt5.26□□□□□ -1.57
RPA49Q01080 VAN1YML115C 1608 nt5.26□□□□□ -1.57
RPA49Q01080 HXT14YNL318C 1623 nt5.26□□□□□ -1.57
RPA49Q01080 SER33YIL074C 1410 nt5.25□□□□□ -1.57
RPA49Q01080 RSM10YDR041W 612 nt5.25□□□□□ -1.57
RPA49Q01080 URA3YEL021W 804 nt5.25□□□□□ -1.57
RPA49Q01080 UBC6YER100W 753 nt5.25□□□□□ -1.57
RPA49Q01080 MRPL4YLR439W 960 nt5.25□□□□□ -1.57
RPA49Q01080 YNL019CYNL019C 855 nt5.25□□□□□ -1.57
RPA49Q01080 YNL033WYNL033W 855 nt5.25□□□□□ -1.57
RPA49Q01080 GIP2YER054C 1647 nt5.25□□□□□ -1.57
RPA49Q01080 RIM15YFL033C 5313 nt5.25□□□□□ -1.57
RPA49Q01080 ADE3YGR204W 2841 nt5.24□□□□□ -1.57
RPA49Q01080 SDA1YGR245C 2304 nt5.24□□□□□ -1.57
RPA49Q01080 RGT1YKL038W 3513 nt5.24□□□□□ -1.57
RPA49Q01080 VPS29YHR012W 849 nt5.24□□□□□ -1.57
RPA49Q01080 PEX22YAL055W 543 nt5.24□□□□□ -1.57
RPA49Q01080 RHO4YKR055W 876 nt5.24□□□□□ -1.57
RPA49Q01080 CUE5YOR042W 1236 nt5.24□□□□□ -1.57
RPA49Q01080 DRN1YGR093W 1524 nt5.23□□□□□ -1.57
RPA49Q01080 HXT4YHR092C 1731 nt5.23□□□□□ -1.57
RPA49Q01080 YNG2YHR090C 849 nt5.23□□□□□ -1.57
RPA49Q01080 SUE1YPR151C 621 nt5.23□□□□□ -1.57
RPA49Q01080 DBF2YGR092W 1719 nt5.23□□□□□ -1.57
RPA49Q01080 CLD1YGR110W 1338 nt5.23□□□□□ -1.57
RPA49Q01080 YMD8YML038C 1329 nt5.23□□□□□ -1.57
RPA49Q01080 UGA2YBR006W 1494 nt5.22□□□□□ -1.57
RPA49Q01080 UBA1YKL210W 3075 nt5.22□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms