Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.57□□□□□ -0.08
HSPG2P98160 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.57□□□□□ -0.08
HSPG2P98160 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HSPG2P98160 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.57□□□□□ -0.08
HSPG2P98160 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HSPG2P98160 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HSPG2P98160 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HSPG2P98160 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HSPG2P98160 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.56□□□□□ -0.08
HSPG2P98160 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.56□□□□□ -0.08
HSPG2P98160 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HSPG2P98160 CCDC92B-201ENST00000575506 885 ntBASIC14.56□□□□□ -0.08
HSPG2P98160 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.56□□□□□ -0.08
HSPG2P98160 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HSPG2P98160 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.56□□□□□ -0.08
HSPG2P98160 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.56□□□□□ -0.08
HSPG2P98160 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HSPG2P98160 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.55□□□□□ -0.08
HSPG2P98160 BX842568.3-201ENST00000418104 571 ntBASIC14.55□□□□□ -0.08
HSPG2P98160 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HSPG2P98160 TSPY20P-201ENST00000450910 630 ntBASIC14.55□□□□□ -0.08
HSPG2P98160 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HSPG2P98160 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.55□□□□□ -0.08
HSPG2P98160 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HSPG2P98160 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HSPG2P98160 AC090877.2-201ENST00000558441 1738 ntBASIC14.54□□□□□ -0.08
HSPG2P98160 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HSPG2P98160 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HSPG2P98160 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HSPG2P98160 AC008687.6-201ENST00000596318 630 ntBASIC14.54□□□□□ -0.08
HSPG2P98160 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HSPG2P98160 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HSPG2P98160 AL499627.2-201ENST00000606283 725 ntBASIC14.54□□□□□ -0.08
HSPG2P98160 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.53□□□□□ -0.08
HSPG2P98160 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.53□□□□□ -0.08
HSPG2P98160 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.53□□□□□ -0.08
HSPG2P98160 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.53□□□□□ -0.08
HSPG2P98160 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.53□□□□□ -0.08
HSPG2P98160 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HSPG2P98160 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.52□□□□□ -0.08
HSPG2P98160 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.52□□□□□ -0.08
HSPG2P98160 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HSPG2P98160 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.52□□□□□ -0.08
HSPG2P98160 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.52□□□□□ -0.08
HSPG2P98160 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.52□□□□□ -0.08
HSPG2P98160 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HSPG2P98160 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HSPG2P98160 AL355802.2-201ENST00000402069 882 ntBASIC14.52□□□□□ -0.09
HSPG2P98160 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.52□□□□□ -0.09
HSPG2P98160 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.52□□□□□ -0.09
HSPG2P98160 NTF6G-201ENST00000591094 616 ntBASIC14.52□□□□□ -0.09
HSPG2P98160 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.52□□□□□ -0.09
HSPG2P98160 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.52□□□□□ -0.09
HSPG2P98160 TMEM191A-211ENST00000637163 1067 ntBASIC14.52□□□□□ -0.09
HSPG2P98160 LINC01003-201ENST00000564834 1764 ntBASIC14.51□□□□□ -0.09
HSPG2P98160 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HSPG2P98160 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.51□□□□□ -0.09
HSPG2P98160 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.51□□□□□ -0.09
HSPG2P98160 AC073111.5-205ENST00000641717 521 ntBASIC14.51□□□□□ -0.09
HSPG2P98160 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.51□□□□□ -0.09
HSPG2P98160 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HSPG2P98160 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HSPG2P98160 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HSPG2P98160 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.51□□□□□ -0.09
HSPG2P98160 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.51□□□□□ -0.09
HSPG2P98160 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HSPG2P98160 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HSPG2P98160 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HSPG2P98160 MIR3181-201ENST00000578512 73 ntBASIC14.51□□□□□ -0.09
HSPG2P98160 AC080038.1-201ENST00000611274 1154 ntBASIC14.51□□□□□ -0.09
HSPG2P98160 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.51□□□□□ -0.09
HSPG2P98160 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HSPG2P98160 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HSPG2P98160 GUSBP6-202ENST00000438529 1198 ntBASIC14.5□□□□□ -0.09
HSPG2P98160 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.5□□□□□ -0.09
HSPG2P98160 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HSPG2P98160 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HSPG2P98160 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HSPG2P98160 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HSPG2P98160 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC14.5□□□□□ -0.09
HSPG2P98160 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HSPG2P98160 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
HSPG2P98160 KRT18P6-201ENST00000555540 1265 ntBASIC14.5□□□□□ -0.09
HSPG2P98160 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HSPG2P98160 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
HSPG2P98160 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HSPG2P98160 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms