Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 PREB-202ENST00000406567 1910 ntTSL 5 BASIC15.9■□□□□ 0.14
CKS1BP61024 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CKS1BP61024 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.89■□□□□ 0.13
CKS1BP61024 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CKS1BP61024 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CKS1BP61024 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CKS1BP61024 HES6-205ENST00000409356 528 ntTSL 2 BASIC15.89■□□□□ 0.13
CKS1BP61024 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.89■□□□□ 0.13
CKS1BP61024 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.89■□□□□ 0.13
CKS1BP61024 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC15.89■□□□□ 0.13
CKS1BP61024 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CKS1BP61024 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC15.89■□□□□ 0.13
CKS1BP61024 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 AC097639.1-201ENST00000565519 1891 ntBASIC15.88■□□□□ 0.13
CKS1BP61024 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.88■□□□□ 0.13
CKS1BP61024 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CKS1BP61024 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CKS1BP61024 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CKS1BP61024 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CKS1BP61024 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC15.87■□□□□ 0.13
CKS1BP61024 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC15.87■□□□□ 0.13
CKS1BP61024 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CKS1BP61024 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CKS1BP61024 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CKS1BP61024 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
CKS1BP61024 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.86■□□□□ 0.13
CKS1BP61024 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CKS1BP61024 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 LINC01124-201ENST00000409786 2117 ntBASIC15.86■□□□□ 0.13
CKS1BP61024 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CKS1BP61024 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.86■□□□□ 0.13
CKS1BP61024 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.86■□□□□ 0.13
CKS1BP61024 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.86■□□□□ 0.13
CKS1BP61024 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CKS1BP61024 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CKS1BP61024 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CKS1BP61024 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC15.85■□□□□ 0.13
CKS1BP61024 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.85■□□□□ 0.13
CKS1BP61024 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CKS1BP61024 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CKS1BP61024 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CKS1BP61024 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS1BP61024 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CKS1BP61024 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.85■□□□□ 0.13
CKS1BP61024 EED-207ENST00000528180 1745 ntTSL 5 BASIC15.85■□□□□ 0.13
CKS1BP61024 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CKS1BP61024 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.84■□□□□ 0.13
CKS1BP61024 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.84■□□□□ 0.13
CKS1BP61024 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CKS1BP61024 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CKS1BP61024 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.83■□□□□ 0.13
CKS1BP61024 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS1BP61024 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.83■□□□□ 0.12
CKS1BP61024 HLA-V-202ENST00000446817 847 ntBASIC15.83■□□□□ 0.12
CKS1BP61024 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CKS1BP61024 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CKS1BP61024 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CKS1BP61024 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.83■□□□□ 0.12
CKS1BP61024 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms