Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.89■□□□□ 0.93
SUMO3P55854 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SUMO3P55854 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SUMO3P55854 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUMO3P55854 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUMO3P55854 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SUMO3P55854 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUMO3P55854 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.88■□□□□ 0.93
SUMO3P55854 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUMO3P55854 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUMO3P55854 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.88■□□□□ 0.93
SUMO3P55854 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUMO3P55854 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SUMO3P55854 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SUMO3P55854 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
SUMO3P55854 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SUMO3P55854 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SUMO3P55854 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.87■□□□□ 0.93
SUMO3P55854 AL035685.1-201ENST00000636663 812 ntBASIC20.87■□□□□ 0.93
SUMO3P55854 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SUMO3P55854 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.87■□□□□ 0.93
SUMO3P55854 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SUMO3P55854 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SUMO3P55854 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SUMO3P55854 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
SUMO3P55854 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SUMO3P55854 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SUMO3P55854 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SUMO3P55854 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SUMO3P55854 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SUMO3P55854 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SUMO3P55854 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SUMO3P55854 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.85■□□□□ 0.93
SUMO3P55854 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SUMO3P55854 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SUMO3P55854 AC239859.2-201ENST00000444165 318 ntBASIC20.85■□□□□ 0.93
SUMO3P55854 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.85■□□□□ 0.93
SUMO3P55854 MIR4787-201ENST00000607364 84 ntBASIC20.85■□□□□ 0.93
SUMO3P55854 AC092028.1-203ENST00000608262 953 ntBASIC20.85■□□□□ 0.93
SUMO3P55854 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SUMO3P55854 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SUMO3P55854 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SUMO3P55854 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SUMO3P55854 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SUMO3P55854 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SUMO3P55854 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SUMO3P55854 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SUMO3P55854 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SUMO3P55854 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.84■□□□□ 0.93
SUMO3P55854 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.84■□□□□ 0.93
SUMO3P55854 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SUMO3P55854 AC004812.2-201ENST00000611079 2094 ntBASIC20.84■□□□□ 0.93
SUMO3P55854 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SUMO3P55854 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SUMO3P55854 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SUMO3P55854 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SUMO3P55854 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.83■□□□□ 0.93
SUMO3P55854 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.83■□□□□ 0.93
SUMO3P55854 MIR6722-201ENST00000617286 78 ntBASIC20.83■□□□□ 0.93
SUMO3P55854 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.83■□□□□ 0.93
SUMO3P55854 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SUMO3P55854 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SUMO3P55854 ALDH1A3-203ENST00000557963 1670 ntBASIC20.83■□□□□ 0.92
SUMO3P55854 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SUMO3P55854 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SUMO3P55854 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SUMO3P55854 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.82■□□□□ 0.92
SUMO3P55854 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SUMO3P55854 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.82■□□□□ 0.92
SUMO3P55854 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SUMO3P55854 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SUMO3P55854 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SUMO3P55854 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.81■□□□□ 0.92
SUMO3P55854 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SUMO3P55854 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.81■□□□□ 0.92
SUMO3P55854 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
SUMO3P55854 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SUMO3P55854 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.81■□□□□ 0.92
SUMO3P55854 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SUMO3P55854 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.81■□□□□ 0.92
SUMO3P55854 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.81■□□□□ 0.92
SUMO3P55854 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SUMO3P55854 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SUMO3P55854 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SUMO3P55854 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SUMO3P55854 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SUMO3P55854 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SUMO3P55854 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SUMO3P55854 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SUMO3P55854 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SUMO3P55854 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.8■□□□□ 0.92
SUMO3P55854 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SUMO3P55854 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SUMO3P55854 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SUMO3P55854 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SUMO3P55854 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.79■□□□□ 0.92
SUMO3P55854 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SUMO3P55854 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SUMO3P55854 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.79■□□□□ 0.92
SUMO3P55854 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms