Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.62■■□□□ 1.37
CDH4P55283 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH4P55283 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.62■■□□□ 1.37
CDH4P55283 MIR6724-1-201ENST00000616420 92 ntBASIC23.62■■□□□ 1.37
CDH4P55283 MIR6724-2-201ENST00000616483 92 ntBASIC23.62■■□□□ 1.37
CDH4P55283 MIR6724-4-201ENST00000617390 92 ntBASIC23.62■■□□□ 1.37
CDH4P55283 MIR6724-3-201ENST00000622482 92 ntBASIC23.62■■□□□ 1.37
CDH4P55283 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH4P55283 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CDH4P55283 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH4P55283 AC135731.1-201ENST00000569415 2548 ntBASIC23.62■■□□□ 1.37
CDH4P55283 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.61■■□□□ 1.37
CDH4P55283 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CDH4P55283 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.61■■□□□ 1.37
CDH4P55283 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.61■■□□□ 1.37
CDH4P55283 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CDH4P55283 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
CDH4P55283 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDH4P55283 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
CDH4P55283 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH4P55283 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.6■■□□□ 1.37
CDH4P55283 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH4P55283 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.6■■□□□ 1.37
CDH4P55283 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.6■■□□□ 1.37
CDH4P55283 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDH4P55283 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDH4P55283 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH4P55283 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.59■■□□□ 1.37
CDH4P55283 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDH4P55283 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CDH4P55283 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.59■■□□□ 1.37
CDH4P55283 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH4P55283 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH4P55283 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDH4P55283 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDH4P55283 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.58■■□□□ 1.37
CDH4P55283 AC131212.1-201ENST00000613771 668 ntBASIC23.58■■□□□ 1.37
CDH4P55283 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.58■■□□□ 1.36
CDH4P55283 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDH4P55283 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDH4P55283 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.57■■□□□ 1.36
CDH4P55283 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDH4P55283 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.57■■□□□ 1.36
CDH4P55283 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH4P55283 AL139125.2-201ENST00000623134 1869 ntBASIC23.56■■□□□ 1.36
CDH4P55283 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.56■■□□□ 1.36
CDH4P55283 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.56■■□□□ 1.36
CDH4P55283 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH4P55283 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDH4P55283 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDH4P55283 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.55■■□□□ 1.36
CDH4P55283 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CDH4P55283 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.55■■□□□ 1.36
CDH4P55283 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.55■■□□□ 1.36
CDH4P55283 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.55■■□□□ 1.36
CDH4P55283 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDH4P55283 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.54■■□□□ 1.36
CDH4P55283 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.54■■□□□ 1.36
CDH4P55283 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDH4P55283 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDH4P55283 AC141586.4-201ENST00000624558 1573 ntBASIC23.54■■□□□ 1.36
CDH4P55283 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH4P55283 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH4P55283 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDH4P55283 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH4P55283 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH4P55283 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDH4P55283 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH4P55283 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH4P55283 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDH4P55283 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDH4P55283 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH4P55283 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.53■■□□□ 1.36
CDH4P55283 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.53■■□□□ 1.36
CDH4P55283 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.53■■□□□ 1.36
CDH4P55283 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDH4P55283 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDH4P55283 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH4P55283 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH4P55283 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH4P55283 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH4P55283 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.52■■□□□ 1.36
CDH4P55283 LINC01124-201ENST00000409786 2117 ntBASIC23.52■■□□□ 1.36
CDH4P55283 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH4P55283 AL117332.1-201ENST00000622628 974 ntBASIC23.52■■□□□ 1.36
CDH4P55283 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDH4P55283 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms