Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.2■□□□□ 0.83
HCFC1P51610 AC097381.1-201ENST00000429019 1296 ntBASIC20.2■□□□□ 0.83
HCFC1P51610 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCFC1P51610 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HCFC1P51610 AC087623.3-201ENST00000607047 1098 ntBASIC20.2■□□□□ 0.82
HCFC1P51610 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HCFC1P51610 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC1P51610 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC1P51610 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.19■□□□□ 0.82
HCFC1P51610 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.19■□□□□ 0.82
HCFC1P51610 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.19■□□□□ 0.82
HCFC1P51610 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC1P51610 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC1P51610 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCFC1P51610 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.19■□□□□ 0.82
HCFC1P51610 RASA4CP-201ENST00000424092 1398 ntBASIC20.18■□□□□ 0.82
HCFC1P51610 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.18■□□□□ 0.82
HCFC1P51610 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC1P51610 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.18■□□□□ 0.82
HCFC1P51610 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC1P51610 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC1P51610 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC1P51610 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC1P51610 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCFC1P51610 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
HCFC1P51610 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC1P51610 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.17■□□□□ 0.82
HCFC1P51610 MIR6821-201ENST00000617625 74 ntBASIC20.17■□□□□ 0.82
HCFC1P51610 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HCFC1P51610 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC1P51610 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC1P51610 SERBP1P1-201ENST00000396021 1160 ntBASIC20.17■□□□□ 0.82
HCFC1P51610 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HCFC1P51610 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC1P51610 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC1P51610 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC1P51610 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.16■□□□□ 0.82
HCFC1P51610 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC1P51610 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.16■□□□□ 0.82
HCFC1P51610 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.16■□□□□ 0.82
HCFC1P51610 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.16■□□□□ 0.82
HCFC1P51610 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.16■□□□□ 0.82
HCFC1P51610 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.16■□□□□ 0.82
HCFC1P51610 AC011298.3-201ENST00000615796 283 ntBASIC20.16■□□□□ 0.82
HCFC1P51610 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC1P51610 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HCFC1P51610 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HCFC1P51610 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HCFC1P51610 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.15■□□□□ 0.82
HCFC1P51610 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HCFC1P51610 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HCFC1P51610 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.15■□□□□ 0.82
HCFC1P51610 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.15■□□□□ 0.82
HCFC1P51610 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HCFC1P51610 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HCFC1P51610 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
HCFC1P51610 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HCFC1P51610 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
HCFC1P51610 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HCFC1P51610 MIR4767-201ENST00000582827 78 ntBASIC20.14■□□□□ 0.81
HCFC1P51610 CA15P2-201ENST00000611168 834 ntBASIC20.14■□□□□ 0.81
HCFC1P51610 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HCFC1P51610 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.13■□□□□ 0.81
HCFC1P51610 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
HCFC1P51610 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HCFC1P51610 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.13■□□□□ 0.81
HCFC1P51610 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HCFC1P51610 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HCFC1P51610 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.13■□□□□ 0.81
HCFC1P51610 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HCFC1P51610 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.12■□□□□ 0.81
HCFC1P51610 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.12■□□□□ 0.81
HCFC1P51610 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HCFC1P51610 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.12■□□□□ 0.81
HCFC1P51610 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.12■□□□□ 0.81
HCFC1P51610 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
HCFC1P51610 AC091305.1-201ENST00000479476 895 ntBASIC20.12■□□□□ 0.81
HCFC1P51610 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.12■□□□□ 0.81
HCFC1P51610 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
HCFC1P51610 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HCFC1P51610 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 C17orf82-201ENST00000623772 1530 ntBASIC20.11■□□□□ 0.81
HCFC1P51610 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HCFC1P51610 AL162430.1-201ENST00000480705 870 ntBASIC20.11■□□□□ 0.81
HCFC1P51610 AC099791.2-201ENST00000605725 427 ntBASIC20.11■□□□□ 0.81
HCFC1P51610 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
HCFC1P51610 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HCFC1P51610 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms