Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 CDC28YBR160W 897 nt6.72□□□□□ -1.33
SSM4P40318 UMP1YBR173C 447 nt6.72□□□□□ -1.33
SSM4P40318 YCL012CYCL012C 405 nt6.72□□□□□ -1.33
SSM4P40318 TUB3YML124C 1338 nt6.71□□□□□ -1.33
SSM4P40318 UBX2YML013W 1755 nt6.71□□□□□ -1.34
SSM4P40318 MRF1YGL143C 1242 nt6.71□□□□□ -1.34
SSM4P40318 PAP1YKR002W 1707 nt6.71□□□□□ -1.34
SSM4P40318 PUT1YLR142W 1431 nt6.71□□□□□ -1.34
SSM4P40318 IMD3YLR432W 1572 nt6.71□□□□□ -1.34
SSM4P40318 GUF1YLR289W 1938 nt6.7□□□□□ -1.34
SSM4P40318 RVB1YDR190C 1392 nt6.7□□□□□ -1.34
SSM4P40318 FRS1YLR060W 1788 nt6.7□□□□□ -1.34
SSM4P40318 APM2YHL019C 1818 nt6.7□□□□□ -1.34
SSM4P40318 MAG2YLR427W 2013 nt6.69□□□□□ -1.34
SSM4P40318 PRP2YNR011C 2631 nt6.69□□□□□ -1.34
SSM4P40318 CNM67YNL225C 1746 nt6.69□□□□□ -1.34
SSM4P40318 SSB2YNL209W 1842 nt6.69□□□□□ -1.34
SSM4P40318 CIN5YOR028C 888 nt6.69□□□□□ -1.34
SSM4P40318 SAF1YBR280C 1914 nt6.69□□□□□ -1.34
SSM4P40318 PAL1YDR348C 1500 nt6.69□□□□□ -1.34
SSM4P40318 YPL245WYPL245W 1365 nt6.68□□□□□ -1.34
SSM4P40318 TDA6YPR157W 1404 nt6.68□□□□□ -1.34
SSM4P40318 CDC10YCR002C 969 nt6.68□□□□□ -1.34
SSM4P40318 SYP1YCR030C 2613 nt6.67□□□□□ -1.34
SSM4P40318 YDL121CYDL121C 450 nt6.67□□□□□ -1.34
SSM4P40318 TRP1YDR007W 675 nt6.67□□□□□ -1.34
SSM4P40318 YKL023WYKL023W 834 nt6.67□□□□□ -1.34
SSM4P40318 CBT1YKL208W 816 nt6.67□□□□□ -1.34
SSM4P40318 TFB4YPR056W 1017 nt6.67□□□□□ -1.34
SSM4P40318 GSP2YOR185C 663 nt6.66□□□□□ -1.34
SSM4P40318 YJL206CYJL206C 2277 nt6.65□□□□□ -1.34
SSM4P40318 RCK2YLR248W 1833 nt6.65□□□□□ -1.35
SSM4P40318 KGD1YIL125W 3045 nt6.65□□□□□ -1.35
SSM4P40318 CBF5YLR175W 1452 nt6.65□□□□□ -1.35
SSM4P40318 DEF1YKL054C 2217 nt6.64□□□□□ -1.35
SSM4P40318 PWP1YLR196W 1731 nt6.64□□□□□ -1.35
SSM4P40318 ECM23YPL021W 564 nt6.64□□□□□ -1.35
SSM4P40318 snR17bsnR17b 332 nt6.64□□□□□ -1.35
SSM4P40318 ECM2YBR065C 1095 nt6.64□□□□□ -1.35
SSM4P40318 ARO10YDR380W 1908 nt6.63□□□□□ -1.35
SSM4P40318 AUA1YFL010W-A 285 nt6.63□□□□□ -1.35
SSM4P40318 YJR012CYJR012C 624 nt6.63□□□□□ -1.35
SSM4P40318 ACP1YKL192C 378 nt6.63□□□□□ -1.35
SSM4P40318 FRE3YOR381W 2136 nt6.63□□□□□ -1.35
SSM4P40318 EMP46YLR080W 1335 nt6.62□□□□□ -1.35
SSM4P40318 PSY4YBL046W 1326 nt6.62□□□□□ -1.35
SSM4P40318 AIF1YNR074C 1137 nt6.62□□□□□ -1.35
SSM4P40318 PDR10YOR328W 4695 nt6.62□□□□□ -1.35
SSM4P40318 CDS1YBR029C 1374 nt6.61□□□□□ -1.35
SSM4P40318 CIA2YHR122W 696 nt6.61□□□□□ -1.35
SSM4P40318 ERP2YAL007C 648 nt6.61□□□□□ -1.35
SSM4P40318 URE2YNL229C 1065 nt6.61□□□□□ -1.35
SSM4P40318 MAK3YPR051W 531 nt6.61□□□□□ -1.35
SSM4P40318 ALG6YOR002W 1635 nt6.61□□□□□ -1.35
SSM4P40318 JJJ3YJR097W 519 nt6.6□□□□□ -1.35
SSM4P40318 YAR023CYAR023C 540 nt6.6□□□□□ -1.35
SSM4P40318 YBL070CYBL070C 321 nt6.6□□□□□ -1.35
SSM4P40318 SAP4YGL229C 2457 nt6.6□□□□□ -1.35
SSM4P40318 STE20YHL007C 2820 nt6.6□□□□□ -1.35
SSM4P40318 DAL4YIR028W 1908 nt6.6□□□□□ -1.35
SSM4P40318 PCT1YGR202C 1275 nt6.59□□□□□ -1.35
SSM4P40318 YNL247WYNL247W 2304 nt6.59□□□□□ -1.35
SSM4P40318 YMR111CYMR111C 1389 nt6.59□□□□□ -1.36
SSM4P40318 AKL1YBR059C 3327 nt6.58□□□□□ -1.36
SSM4P40318 PAD1YDR538W 729 nt6.58□□□□□ -1.36
SSM4P40318 YPR109WYPR109W 885 nt6.58□□□□□ -1.36
SSM4P40318 NOP58YOR310C 1536 nt6.58□□□□□ -1.36
SSM4P40318 RGT1YKL038W 3513 nt6.57□□□□□ -1.36
SSM4P40318 NMD3YHR170W 1557 nt6.57□□□□□ -1.36
SSM4P40318 SNA2YDR525W-A 240 nt6.57□□□□□ -1.36
SSM4P40318 RPL43BYJR094W-A 279 nt6.57□□□□□ -1.36
SSM4P40318 VPS72YDR485C 2388 nt6.57□□□□□ -1.36
SSM4P40318 NCS6YGL211W 1080 nt6.56□□□□□ -1.36
SSM4P40318 YJU2YKL095W 837 nt6.56□□□□□ -1.36
SSM4P40318 RHO4YKR055W 876 nt6.56□□□□□ -1.36
SSM4P40318 RGS2YOR107W 930 nt6.56□□□□□ -1.36
SSM4P40318 RPO26YPR187W 468 nt6.56□□□□□ -1.36
SSM4P40318 AIM17YHL021C 1398 nt6.56□□□□□ -1.36
SSM4P40318 BNA5YLR231C 1362 nt6.56□□□□□ -1.36
SSM4P40318 ZPR1YGR211W 1461 nt6.55□□□□□ -1.36
SSM4P40318 SDA1YGR245C 2304 nt6.55□□□□□ -1.36
SSM4P40318 SNF11YDR073W 510 nt6.55□□□□□ -1.36
SSM4P40318 UBI4YLL039C 1146 nt6.55□□□□□ -1.36
SSM4P40318 OCA1YNL099C 717 nt6.55□□□□□ -1.36
SSM4P40318 GAD1YMR250W 1758 nt6.55□□□□□ -1.36
SSM4P40318 MNT2YGL257C 1677 nt6.55□□□□□ -1.36
SSM4P40318 TYW3YGL050W 822 nt6.54□□□□□ -1.36
SSM4P40318 TAF11YML015C 1041 nt6.54□□□□□ -1.36
SSM4P40318 YNL194CYNL194C 906 nt6.54□□□□□ -1.36
SSM4P40318 MAP2YBL091C 1266 nt6.54□□□□□ -1.36
SSM4P40318 FAA4YMR246W 2085 nt6.54□□□□□ -1.36
SSM4P40318 ATG7YHR171W 1893 nt6.54□□□□□ -1.36
SSM4P40318 IRS4YKR019C 1848 nt6.53□□□□□ -1.36
SSM4P40318 tS(AGA)D3tS(AGA)D3 83 nt6.53□□□□□ -1.36
SSM4P40318 COA3YJL062W-A 258 nt6.53□□□□□ -1.36
SSM4P40318 DBR1YKL149C 1218 nt6.53□□□□□ -1.36
SSM4P40318 SOL1YNR034W 966 nt6.53□□□□□ -1.36
SSM4P40318 PEP4YPL154C 1218 nt6.53□□□□□ -1.36
SSM4P40318 ATG18YFR021W 1503 nt6.53□□□□□ -1.36
SSM4P40318 RAD28YDR030C 1521 nt6.52□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms