Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SOX6P35712 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.55■□□□□ 0.88
SOX6P35712 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SOX6P35712 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SOX6P35712 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SOX6P35712 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.54■□□□□ 0.88
SOX6P35712 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SOX6P35712 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SOX6P35712 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
SOX6P35712 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX6P35712 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SOX6P35712 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX6P35712 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX6P35712 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOX6P35712 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SOX6P35712 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOX6P35712 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SOX6P35712 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 C1orf229-201ENST00000623686 2258 ntBASIC20.52■□□□□ 0.88
SOX6P35712 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
SOX6P35712 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SOX6P35712 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SOX6P35712 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOX6P35712 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SOX6P35712 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.51■□□□□ 0.87
SOX6P35712 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 GUSBP5-202ENST00000510805 1989 ntBASIC20.51■□□□□ 0.87
SOX6P35712 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SOX6P35712 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SOX6P35712 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOX6P35712 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.5■□□□□ 0.87
SOX6P35712 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SOX6P35712 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SOX6P35712 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.5■□□□□ 0.87
SOX6P35712 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SOX6P35712 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.5■□□□□ 0.87
SOX6P35712 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOX6P35712 AL359504.2-201ENST00000605506 1601 ntBASIC20.49■□□□□ 0.87
SOX6P35712 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.49■□□□□ 0.87
SOX6P35712 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.49■□□□□ 0.87
SOX6P35712 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SOX6P35712 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOX6P35712 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.48■□□□□ 0.87
SOX6P35712 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOX6P35712 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX6P35712 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SOX6P35712 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOX6P35712 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOX6P35712 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX6P35712 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOX6P35712 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.48■□□□□ 0.87
SOX6P35712 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 ABHD17AP4-201ENST00000411545 909 ntBASIC20.47■□□□□ 0.87
SOX6P35712 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.47■□□□□ 0.87
SOX6P35712 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SOX6P35712 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 ECEL1P1-201ENST00000373592 1742 ntBASIC20.47■□□□□ 0.87
SOX6P35712 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOX6P35712 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOX6P35712 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.46■□□□□ 0.87
SOX6P35712 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOX6P35712 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms