Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.66■□□□□ 0.58
SAA4P35542 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA4P35542 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SAA4P35542 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.65■□□□□ 0.58
SAA4P35542 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA4P35542 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.65■□□□□ 0.58
SAA4P35542 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA4P35542 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SAA4P35542 AC138932.3-201ENST00000567634 1902 ntBASIC18.64■□□□□ 0.58
SAA4P35542 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SAA4P35542 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA4P35542 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SAA4P35542 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SAA4P35542 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA4P35542 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA4P35542 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SAA4P35542 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA4P35542 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SAA4P35542 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SAA4P35542 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SAA4P35542 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.63■□□□□ 0.57
SAA4P35542 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.63■□□□□ 0.57
SAA4P35542 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.63■□□□□ 0.57
SAA4P35542 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SAA4P35542 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SAA4P35542 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SAA4P35542 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SAA4P35542 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SAA4P35542 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA4P35542 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SAA4P35542 AC131281.2-201ENST00000520478 145 ntBASIC18.62■□□□□ 0.57
SAA4P35542 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SAA4P35542 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA4P35542 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SAA4P35542 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA4P35542 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA4P35542 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA4P35542 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA4P35542 AC005703.6-201ENST00000623265 1329 ntBASIC18.61■□□□□ 0.57
SAA4P35542 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.61■□□□□ 0.57
SAA4P35542 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SAA4P35542 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.61■□□□□ 0.57
SAA4P35542 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.61■□□□□ 0.57
SAA4P35542 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SAA4P35542 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA4P35542 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.6■□□□□ 0.57
SAA4P35542 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SAA4P35542 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.6■□□□□ 0.57
SAA4P35542 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.6■□□□□ 0.57
SAA4P35542 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.6■□□□□ 0.57
SAA4P35542 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.6■□□□□ 0.57
SAA4P35542 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.6■□□□□ 0.57
SAA4P35542 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.6■□□□□ 0.57
SAA4P35542 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SAA4P35542 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA4P35542 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SAA4P35542 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 AC135731.1-201ENST00000569415 2548 ntBASIC18.59■□□□□ 0.57
SAA4P35542 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.59■□□□□ 0.57
SAA4P35542 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.59■□□□□ 0.57
SAA4P35542 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.59■□□□□ 0.57
SAA4P35542 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.59■□□□□ 0.57
SAA4P35542 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SAA4P35542 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA4P35542 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SAA4P35542 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SAA4P35542 AL161729.1-201ENST00000604104 1402 ntBASIC18.58■□□□□ 0.57
SAA4P35542 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SAA4P35542 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SAA4P35542 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SAA4P35542 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.58■□□□□ 0.56
SAA4P35542 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.58■□□□□ 0.56
SAA4P35542 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SAA4P35542 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.57■□□□□ 0.56
SAA4P35542 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA4P35542 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms