Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LMO1P25800 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMO1P25800 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
LMO1P25800 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LMO1P25800 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.34■□□□□ 0.69
LMO1P25800 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMO1P25800 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO1P25800 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO1P25800 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMO1P25800 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LMO1P25800 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LMO1P25800 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.33■□□□□ 0.68
LMO1P25800 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMO1P25800 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.33■□□□□ 0.68
LMO1P25800 PVT1_1.1-201ENST00000615125 194 ntBASIC19.33■□□□□ 0.68
LMO1P25800 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO1P25800 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMO1P25800 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LMO1P25800 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.32■□□□□ 0.68
LMO1P25800 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LMO1P25800 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO1P25800 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.32■□□□□ 0.68
LMO1P25800 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.32■□□□□ 0.68
LMO1P25800 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.32■□□□□ 0.68
LMO1P25800 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
LMO1P25800 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
LMO1P25800 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.32■□□□□ 0.68
LMO1P25800 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMO1P25800 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.31■□□□□ 0.68
LMO1P25800 KRT18P24-201ENST00000344739 1156 ntBASIC19.31■□□□□ 0.68
LMO1P25800 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.31■□□□□ 0.68
LMO1P25800 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.31■□□□□ 0.68
LMO1P25800 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMO1P25800 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.3■□□□□ 0.68
LMO1P25800 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.3■□□□□ 0.68
LMO1P25800 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.3■□□□□ 0.68
LMO1P25800 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.3■□□□□ 0.68
LMO1P25800 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMO1P25800 ABCB10P4-201ENST00000566803 2184 ntBASIC19.29■□□□□ 0.68
LMO1P25800 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.29■□□□□ 0.68
LMO1P25800 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO1P25800 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LMO1P25800 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.29■□□□□ 0.68
LMO1P25800 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.29■□□□□ 0.68
LMO1P25800 AC010980.1-201ENST00000587192 1142 ntBASIC19.29■□□□□ 0.68
LMO1P25800 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LMO1P25800 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO1P25800 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMO1P25800 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO1P25800 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMO1P25800 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LMO1P25800 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.28■□□□□ 0.68
LMO1P25800 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO1P25800 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMO1P25800 AC120024.1-201ENST00000562672 995 ntBASIC19.28■□□□□ 0.68
LMO1P25800 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMO1P25800 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.28■□□□□ 0.68
LMO1P25800 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO1P25800 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO1P25800 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LMO1P25800 AL022069.1-201ENST00000568025 1636 ntBASIC19.27■□□□□ 0.68
LMO1P25800 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.27■□□□□ 0.68
LMO1P25800 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.27■□□□□ 0.68
LMO1P25800 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.27■□□□□ 0.68
LMO1P25800 MIR4508-201ENST00000584178 70 ntBASIC19.27■□□□□ 0.68
LMO1P25800 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LMO1P25800 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.27■□□□□ 0.67
LMO1P25800 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LMO1P25800 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LMO1P25800 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.26■□□□□ 0.67
LMO1P25800 AL033527.3-201ENST00000566366 1196 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms