Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HIST1H1CP16403 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HIST1H1CP16403 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HIST1H1CP16403 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.61■□□□□ 0.89
HIST1H1CP16403 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.61■□□□□ 0.89
HIST1H1CP16403 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 C9orf163-202ENST00000624034 2573 ntBASIC20.61■□□□□ 0.89
HIST1H1CP16403 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H1CP16403 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
HIST1H1CP16403 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H1CP16403 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H1CP16403 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H1CP16403 KRT18P60-201ENST00000312876 1297 ntBASIC20.6■□□□□ 0.89
HIST1H1CP16403 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HIST1H1CP16403 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.6■□□□□ 0.89
HIST1H1CP16403 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.6■□□□□ 0.89
HIST1H1CP16403 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST1H1CP16403 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H1CP16403 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H1CP16403 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H1CP16403 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST1H1CP16403 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HIST1H1CP16403 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HIST1H1CP16403 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H1CP16403 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1CP16403 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1CP16403 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HIST1H1CP16403 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1CP16403 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HIST1H1CP16403 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1CP16403 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HIST1H1CP16403 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HIST1H1CP16403 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.58■□□□□ 0.89
HIST1H1CP16403 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1CP16403 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.58■□□□□ 0.89
HIST1H1CP16403 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H1CP16403 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HIST1H1CP16403 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H1CP16403 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HIST1H1CP16403 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H1CP16403 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1CP16403 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1CP16403 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HIST1H1CP16403 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.57■□□□□ 0.88
HIST1H1CP16403 AL161729.1-201ENST00000604104 1402 ntBASIC20.57■□□□□ 0.88
HIST1H1CP16403 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HIST1H1CP16403 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H1CP16403 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HIST1H1CP16403 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.56■□□□□ 0.88
HIST1H1CP16403 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H1CP16403 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.56■□□□□ 0.88
HIST1H1CP16403 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1CP16403 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1CP16403 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
HIST1H1CP16403 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.55■□□□□ 0.88
HIST1H1CP16403 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H1CP16403 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1CP16403 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST1H1CP16403 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1CP16403 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1CP16403 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
HIST1H1CP16403 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1CP16403 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1CP16403 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H1CP16403 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST1H1CP16403 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.53■□□□□ 0.88
HIST1H1CP16403 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST1H1CP16403 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.53■□□□□ 0.88
HIST1H1CP16403 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.53■□□□□ 0.88
HIST1H1CP16403 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H1CP16403 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms