Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 GAT3YLR013W 426 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 ATG38YLR211C 681 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 TAF13YML098W 504 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 RTC4YNL254C 1206 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 YMR155WYMR155W 1644 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 CDC19YAL038W 1503 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 QRI1YDL103C 1434 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 STE3YKL178C 1413 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 RGD2YFL047W 2145 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 UIP5YKR044W 1332 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 RGD1YBR260C 2001 nt5.98□□□□□ -1.45
TY1A-ER1P0CX71 MIP1YOR330C 3765 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 NSI1YDR026C 1713 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 NHP10YDL002C 612 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 snR7-LsnR7-L 214 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 CWC23YGL128C 852 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 YGR226CYGR226C 210 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 tR(ACG)Q2tR(ACG)Q2 74 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 DYS1YHR068W 1164 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 CKA1YIL035C 1119 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 ICT1YLR099C 1185 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 HMX1YLR205C 954 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 CUP9YPL177C 921 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 YBR287WYBR287W 1284 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 CIK1YMR198W 1785 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 HOG1YLR113W 1308 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 TFC7YOR110W 1308 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 SAG1YJR004C 1953 nt5.97□□□□□ -1.45
TY1A-ER1P0CX71 YEH1YLL012W 1722 nt5.96□□□□□ -1.45
TY1A-ER1P0CX71 DFG5YMR238W 1377 nt5.96□□□□□ -1.45
TY1A-ER1P0CX71 SKS1YPL026C 1509 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 ALG9YNL219C 1668 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 YIP4YGL198W 708 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 NQM1YGR043C 1002 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 LCB3YJL134W 1230 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 MBR1YKL093W 1020 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 GSP1YLR293C 660 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 MRPL16YBL038W 699 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 IRC13YOR235W 315 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 PNT1YOR266W 1272 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 YNL295WYNL295W 1575 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 COM2YER130C 1332 nt5.96□□□□□ -1.46
TY1A-ER1P0CX71 NRG1YDR043C 696 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 TRS31YDR472W 852 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 COBQ0105 1158 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 RTA1YGR213C 954 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 YHR175W-AYHR175W-A 150 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 PWR1PWR1 941 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 PRT1YOR361C 2292 nt5.95□□□□□ -1.46
TY1A-ER1P0CX71 IWR1YDL115C 1062 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 YDR008CYDR008C 351 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 YDR524W-CYDR524W-C 90 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 YFL012W-AYFL012W-A 375 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 PCT1YGR202C 1275 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 SNL1YIL016W 480 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 REC107YJR021C 945 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 YML034C-AYML034C-A 399 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 RUF22RUF22 515 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 YOR364WYOR364W 369 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 SDA1YGR245C 2304 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 SKI2YLR398C 3864 nt5.94□□□□□ -1.46
TY1A-ER1P0CX71 YDR179W-AYDR179W-A 1392 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 PUT1YLR142W 1431 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 MHP1YJL042W 4197 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 CPR4YCR069W 957 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 COS7YDL248W 1152 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 HSP42YDR171W 1128 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 ERV29YGR284C 933 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 AAD10YJR155W 867 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 COS5YJR161C 1152 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 RIF2YLR453C 1188 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 ATG34YOL083W 1239 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 YPR127WYPR127W 1038 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 ARA1YBR149W 1035 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 CTA1YDR256C 1548 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 PST1YDR055W 1335 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 PEX31YGR004W 1389 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 MGA1YGR249W 1371 nt5.93□□□□□ -1.46
TY1A-ER1P0CX71 ATG1YGL180W 2694 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 CCC2YDR270W 3015 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 KIN28YDL108W 921 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 SCM3YDL139C 672 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 COG2YGR120C 789 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 EFG1YGR271C-A 702 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 BAT2YJR148W 1131 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 TAL1YLR354C 1008 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 YOR283WYOR283W 693 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 MSI1YBR195C 1269 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 YIL055CYIL055C 1884 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 SMP1YBR182C 1359 nt5.92□□□□□ -1.46
TY1A-ER1P0CX71 TCM62YBR044C 1719 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 NAF1YNL124W 1479 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 AIM3YBR108W 2844 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 POP1YNL221C 2628 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 IME4YGL192W 1803 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 YDR056CYDR056C 618 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 YPT31YER031C 672 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 YER186CYER186C 921 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 QCR6YFR033C 444 nt5.91□□□□□ -1.46
TY1A-ER1P0CX71 MPO1YGL010W 525 nt5.91□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms