Protein–RNA interactions for Protein: P08237

PFKM, ATP-dependent 6-phosphofructokinase, muscle type, humanhuman

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFKMP08237 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PFKMP08237 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.41■■□□□ 1.66
PFKMP08237 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.4■■□□□ 1.66
PFKMP08237 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PFKMP08237 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PFKMP08237 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PFKMP08237 RASA4CP-201ENST00000424092 1398 ntBASIC25.4■■□□□ 1.66
PFKMP08237 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PFKMP08237 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.4■■□□□ 1.66
PFKMP08237 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PFKMP08237 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
PFKMP08237 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.39■■□□□ 1.65
PFKMP08237 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
PFKMP08237 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PFKMP08237 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PFKMP08237 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PFKMP08237 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.38■■□□□ 1.65
PFKMP08237 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.38■■□□□ 1.65
PFKMP08237 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.38■■□□□ 1.65
PFKMP08237 MIR4767-201ENST00000582827 78 ntBASIC25.38■■□□□ 1.65
PFKMP08237 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PFKMP08237 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
PFKMP08237 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PFKMP08237 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.37■■□□□ 1.65
PFKMP08237 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
PFKMP08237 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PFKMP08237 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PFKMP08237 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PFKMP08237 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PFKMP08237 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
PFKMP08237 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.36■■□□□ 1.65
PFKMP08237 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.36■■□□□ 1.65
PFKMP08237 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.36■■□□□ 1.65
PFKMP08237 AC027682.1-201ENST00000562846 899 ntBASIC25.36■■□□□ 1.65
PFKMP08237 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PFKMP08237 CA15P2-201ENST00000611168 834 ntBASIC25.36■■□□□ 1.65
PFKMP08237 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PFKMP08237 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.36■■□□□ 1.65
PFKMP08237 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PFKMP08237 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.35■■□□□ 1.65
PFKMP08237 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PFKMP08237 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.34■■□□□ 1.65
PFKMP08237 AL162430.1-201ENST00000480705 870 ntBASIC25.34■■□□□ 1.65
PFKMP08237 AL138724.1-201ENST00000606771 1088 ntBASIC25.34■■□□□ 1.65
PFKMP08237 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PFKMP08237 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PFKMP08237 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.33■■□□□ 1.65
PFKMP08237 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PFKMP08237 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.33■■□□□ 1.65
PFKMP08237 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PFKMP08237 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.33■■□□□ 1.65
PFKMP08237 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
PFKMP08237 AC087623.3-201ENST00000607047 1098 ntBASIC25.33■■□□□ 1.65
PFKMP08237 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PFKMP08237 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PFKMP08237 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PFKMP08237 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PFKMP08237 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PFKMP08237 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.32■■□□□ 1.64
PFKMP08237 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PFKMP08237 AC011298.3-201ENST00000615796 283 ntBASIC25.32■■□□□ 1.64
PFKMP08237 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.32■■□□□ 1.64
PFKMP08237 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PFKMP08237 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
PFKMP08237 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PFKMP08237 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.31■■□□□ 1.64
PFKMP08237 AC097639.1-201ENST00000565519 1891 ntBASIC25.31■■□□□ 1.64
PFKMP08237 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.31■■□□□ 1.64
PFKMP08237 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PFKMP08237 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 SERBP1P1-201ENST00000396021 1160 ntBASIC25.3■■□□□ 1.64
PFKMP08237 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.3■■□□□ 1.64
PFKMP08237 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PFKMP08237 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PFKMP08237 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PFKMP08237 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.29■■□□□ 1.64
PFKMP08237 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.29■■□□□ 1.64
PFKMP08237 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PFKMP08237 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PFKMP08237 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PFKMP08237 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PFKMP08237 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PFKMP08237 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PFKMP08237 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PFKMP08237 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PFKMP08237 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.28■■□□□ 1.64
PFKMP08237 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PFKMP08237 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PFKMP08237 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.28■■□□□ 1.64
PFKMP08237 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.28■■□□□ 1.64
PFKMP08237 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.27■■□□□ 1.64
PFKMP08237 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PFKMP08237 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PFKMP08237 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PFKMP08237 IRS3P-201ENST00000223076 1006 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms