Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TCRBP04435 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TCRBP04435 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.56■□□□□ 0.72
TCRBP04435 AC092068.2-201ENST00000590491 1708 ntBASIC19.56■□□□□ 0.72
TCRBP04435 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TCRBP04435 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TCRBP04435 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBP04435 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.55■□□□□ 0.72
TCRBP04435 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBP04435 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBP04435 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.55■□□□□ 0.72
TCRBP04435 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TCRBP04435 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.55■□□□□ 0.72
TCRBP04435 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.54■□□□□ 0.72
TCRBP04435 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TCRBP04435 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.54■□□□□ 0.72
TCRBP04435 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TCRBP04435 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.54■□□□□ 0.72
TCRBP04435 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TCRBP04435 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBP04435 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRBP04435 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRBP04435 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.53■□□□□ 0.72
TCRBP04435 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBP04435 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TCRBP04435 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBP04435 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.53■□□□□ 0.72
TCRBP04435 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.53■□□□□ 0.72
TCRBP04435 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.53■□□□□ 0.72
TCRBP04435 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TCRBP04435 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TCRBP04435 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.53■□□□□ 0.72
TCRBP04435 AL359258.2-201ENST00000564063 1566 ntBASIC19.53■□□□□ 0.72
TCRBP04435 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBP04435 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TCRBP04435 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TCRBP04435 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBP04435 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBP04435 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBP04435 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBP04435 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TCRBP04435 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.52■□□□□ 0.71
TCRBP04435 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TCRBP04435 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TCRBP04435 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TCRBP04435 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBP04435 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.51■□□□□ 0.71
TCRBP04435 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.51■□□□□ 0.71
TCRBP04435 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TCRBP04435 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TCRBP04435 SUZ12P1-203ENST00000578195 985 ntBASIC19.5■□□□□ 0.71
TCRBP04435 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.5■□□□□ 0.71
TCRBP04435 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TCRBP04435 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TCRBP04435 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBP04435 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.49■□□□□ 0.71
TCRBP04435 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TCRBP04435 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBP04435 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBP04435 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.49■□□□□ 0.71
TCRBP04435 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TCRBP04435 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TCRBP04435 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TCRBP04435 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms