Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV3P03979 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRGV3P03979 AC239859.2-201ENST00000444165 318 ntBASIC18.02■□□□□ 0.48
TRGV3P03979 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.02■□□□□ 0.48
TRGV3P03979 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.02■□□□□ 0.48
TRGV3P03979 AL035685.1-201ENST00000636663 812 ntBASIC18.02■□□□□ 0.48
TRGV3P03979 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.02■□□□□ 0.47
TRGV3P03979 AL022069.1-201ENST00000568025 1636 ntBASIC18.01■□□□□ 0.47
TRGV3P03979 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV3P03979 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV3P03979 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.01■□□□□ 0.47
TRGV3P03979 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV3P03979 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRGV3P03979 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRGV3P03979 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.01■□□□□ 0.47
TRGV3P03979 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.01■□□□□ 0.47
TRGV3P03979 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV3P03979 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.01■□□□□ 0.47
TRGV3P03979 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
TRGV3P03979 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV3P03979 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRGV3P03979 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18■□□□□ 0.47
TRGV3P03979 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRGV3P03979 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
TRGV3P03979 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRGV3P03979 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.99■□□□□ 0.47
TRGV3P03979 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 MIR4787-201ENST00000607364 84 ntBASIC17.99■□□□□ 0.47
TRGV3P03979 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 AC021242.3-201ENST00000607598 1377 ntBASIC17.99■□□□□ 0.47
TRGV3P03979 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 AC141586.4-201ENST00000624558 1573 ntBASIC17.99■□□□□ 0.47
TRGV3P03979 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV3P03979 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV3P03979 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.98■□□□□ 0.47
TRGV3P03979 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV3P03979 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.98■□□□□ 0.47
TRGV3P03979 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV3P03979 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRGV3P03979 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRGV3P03979 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV3P03979 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV3P03979 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.97■□□□□ 0.47
TRGV3P03979 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV3P03979 LINC00543-201ENST00000567234 1845 ntBASIC17.97■□□□□ 0.47
TRGV3P03979 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRGV3P03979 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV3P03979 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV3P03979 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV3P03979 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRGV3P03979 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TRGV3P03979 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRGV3P03979 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV3P03979 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV3P03979 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV3P03979 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV3P03979 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRGV3P03979 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV3P03979 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRGV3P03979 AL161729.1-201ENST00000604104 1402 ntBASIC17.96■□□□□ 0.47
TRGV3P03979 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV3P03979 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TRGV3P03979 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV3P03979 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV3P03979 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV3P03979 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV3P03979 AC131274.2-201ENST00000580697 1507 ntBASIC17.95■□□□□ 0.46
TRGV3P03979 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV3P03979 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.95■□□□□ 0.46
TRGV3P03979 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.95■□□□□ 0.46
TRGV3P03979 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.95■□□□□ 0.46
TRGV3P03979 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV3P03979 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV3P03979 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV3P03979 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV3P03979 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV3P03979 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.94■□□□□ 0.46
TRGV3P03979 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.94■□□□□ 0.46
TRGV3P03979 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV3P03979 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRGV3P03979 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV3P03979 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRGV3P03979 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV3P03979 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV3P03979 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV3P03979 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV3P03979 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.94■□□□□ 0.46
TRGV3P03979 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms