Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MT-ND4P03905 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
MT-ND4P03905 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MT-ND4P03905 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND4P03905 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
MT-ND4P03905 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND4P03905 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND4P03905 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.9■□□□□ 0.78
MT-ND4P03905 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MT-ND4P03905 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.9■□□□□ 0.78
MT-ND4P03905 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND4P03905 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MT-ND4P03905 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND4P03905 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.9■□□□□ 0.78
MT-ND4P03905 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-ND4P03905 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.89■□□□□ 0.78
MT-ND4P03905 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND4P03905 RP9P-202ENST00000450133 1212 ntBASIC19.89■□□□□ 0.77
MT-ND4P03905 MIR4449-201ENST00000578365 66 ntBASIC19.89■□□□□ 0.77
MT-ND4P03905 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND4P03905 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-ND4P03905 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
MT-ND4P03905 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND4P03905 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND4P03905 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND4P03905 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.88■□□□□ 0.77
MT-ND4P03905 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND4P03905 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-ND4P03905 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND4P03905 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND4P03905 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND4P03905 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND4P03905 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND4P03905 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MT-ND4P03905 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND4P03905 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND4P03905 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND4P03905 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND4P03905 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.86■□□□□ 0.77
MT-ND4P03905 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.86■□□□□ 0.77
MT-ND4P03905 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND4P03905 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MT-ND4P03905 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND4P03905 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.85■□□□□ 0.77
MT-ND4P03905 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.85■□□□□ 0.77
MT-ND4P03905 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.85■□□□□ 0.77
MT-ND4P03905 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
MT-ND4P03905 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
MT-ND4P03905 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
MT-ND4P03905 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 AC093536.1-201ENST00000569153 554 ntBASIC19.85■□□□□ 0.77
MT-ND4P03905 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MT-ND4P03905 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND4P03905 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND4P03905 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MT-ND4P03905 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND4P03905 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.84■□□□□ 0.77
MT-ND4P03905 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND4P03905 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND4P03905 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND4P03905 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND4P03905 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND4P03905 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND4P03905 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
MT-ND4P03905 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND4P03905 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND4P03905 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND4P03905 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.83■□□□□ 0.77
MT-ND4P03905 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND4P03905 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MT-ND4P03905 AC007029.1-201ENST00000604183 313 ntBASIC19.83■□□□□ 0.77
MT-ND4P03905 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.83■□□□□ 0.76
MT-ND4P03905 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND4P03905 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND4P03905 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.83■□□□□ 0.76
MT-ND4P03905 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND4P03905 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND4P03905 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND4P03905 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MT-ND4P03905 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
MT-ND4P03905 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
MT-ND4P03905 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MT-ND4P03905 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MT-ND4P03905 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms