Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 HLA-V-202ENST00000446817 847 ntBASIC19.93■□□□□ 0.78
HLA-DQB1P01920 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB1P01920 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQB1P01920 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 ANOS2P-203ENST00000472227 1816 ntBASIC19.92■□□□□ 0.78
HLA-DQB1P01920 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 AC092068.2-201ENST00000590491 1708 ntBASIC19.92■□□□□ 0.78
HLA-DQB1P01920 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQB1P01920 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQB1P01920 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQB1P01920 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQB1P01920 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQB1P01920 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQB1P01920 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 AL137060.1-201ENST00000618151 2648 ntBASIC19.86■□□□□ 0.77
HLA-DQB1P01920 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQB1P01920 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB1P01920 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB1P01920 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQB1P01920 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HLA-DQB1P01920 ZNRF2P2-203ENST00000454624 420 ntBASIC19.85■□□□□ 0.77
HLA-DQB1P01920 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB1P01920 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQB1P01920 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DQB1P01920 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms