Protein–RNA interactions for Protein: O95183

VAMP5, Vesicle-associated membrane protein 5, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5O95183 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VAMP5O95183 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VAMP5O95183 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
VAMP5O95183 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VAMP5O95183 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VAMP5O95183 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
VAMP5O95183 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.49■□□□□ 0.87
VAMP5O95183 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.49■□□□□ 0.87
VAMP5O95183 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.49■□□□□ 0.87
VAMP5O95183 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VAMP5O95183 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
VAMP5O95183 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VAMP5O95183 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VAMP5O95183 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VAMP5O95183 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VAMP5O95183 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VAMP5O95183 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VAMP5O95183 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
VAMP5O95183 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.48■□□□□ 0.87
VAMP5O95183 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.48■□□□□ 0.87
VAMP5O95183 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VAMP5O95183 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VAMP5O95183 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
VAMP5O95183 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VAMP5O95183 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.47■□□□□ 0.87
VAMP5O95183 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VAMP5O95183 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VAMP5O95183 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VAMP5O95183 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.47■□□□□ 0.87
VAMP5O95183 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
VAMP5O95183 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.47■□□□□ 0.87
VAMP5O95183 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.47■□□□□ 0.87
VAMP5O95183 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.47■□□□□ 0.87
VAMP5O95183 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
VAMP5O95183 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VAMP5O95183 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.46■□□□□ 0.87
VAMP5O95183 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VAMP5O95183 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VAMP5O95183 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.46■□□□□ 0.87
VAMP5O95183 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VAMP5O95183 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VAMP5O95183 AC239859.2-201ENST00000444165 318 ntBASIC20.46■□□□□ 0.87
VAMP5O95183 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.46■□□□□ 0.87
VAMP5O95183 SNX5-217ENST00000606557 1087 ntBASIC20.46■□□□□ 0.87
VAMP5O95183 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VAMP5O95183 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VAMP5O95183 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VAMP5O95183 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.45■□□□□ 0.86
VAMP5O95183 AC004812.2-201ENST00000611079 2094 ntBASIC20.45■□□□□ 0.86
VAMP5O95183 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.45■□□□□ 0.86
VAMP5O95183 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VAMP5O95183 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.45■□□□□ 0.86
VAMP5O95183 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAMP5O95183 MIR4787-201ENST00000607364 84 ntBASIC20.44■□□□□ 0.86
VAMP5O95183 AC092028.1-203ENST00000608262 953 ntBASIC20.44■□□□□ 0.86
VAMP5O95183 AL035685.1-201ENST00000636663 812 ntBASIC20.44■□□□□ 0.86
VAMP5O95183 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAMP5O95183 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VAMP5O95183 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VAMP5O95183 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAMP5O95183 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAMP5O95183 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VAMP5O95183 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VAMP5O95183 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAMP5O95183 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VAMP5O95183 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.42■□□□□ 0.86
VAMP5O95183 MIR6722-201ENST00000617286 78 ntBASIC20.42■□□□□ 0.86
VAMP5O95183 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.42■□□□□ 0.86
VAMP5O95183 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAMP5O95183 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VAMP5O95183 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.42■□□□□ 0.86
VAMP5O95183 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VAMP5O95183 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.42■□□□□ 0.86
VAMP5O95183 ALDH1A3-203ENST00000557963 1670 ntBASIC20.42■□□□□ 0.86
VAMP5O95183 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VAMP5O95183 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VAMP5O95183 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VAMP5O95183 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.41■□□□□ 0.86
VAMP5O95183 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.41■□□□□ 0.86
VAMP5O95183 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.41■□□□□ 0.86
VAMP5O95183 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.41■□□□□ 0.86
VAMP5O95183 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VAMP5O95183 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VAMP5O95183 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.41■□□□□ 0.86
VAMP5O95183 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VAMP5O95183 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VAMP5O95183 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms