Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CRLF1O75462 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.72■□□□□ 0.59
CRLF1O75462 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CRLF1O75462 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CRLF1O75462 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.72■□□□□ 0.59
CRLF1O75462 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CRLF1O75462 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CRLF1O75462 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 HLA-L-209ENST00000420110 1011 ntBASIC18.71■□□□□ 0.59
CRLF1O75462 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.71■□□□□ 0.59
CRLF1O75462 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.71■□□□□ 0.59
CRLF1O75462 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.71■□□□□ 0.59
CRLF1O75462 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CRLF1O75462 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CRLF1O75462 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.71■□□□□ 0.59
CRLF1O75462 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CRLF1O75462 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.7■□□□□ 0.58
CRLF1O75462 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF1O75462 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF1O75462 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF1O75462 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CRLF1O75462 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CRLF1O75462 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.7■□□□□ 0.58
CRLF1O75462 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF1O75462 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CRLF1O75462 AC241377.3-202ENST00000626088 1088 ntBASIC18.7■□□□□ 0.58
CRLF1O75462 AC241585.3-202ENST00000628937 1088 ntBASIC18.7■□□□□ 0.58
CRLF1O75462 AC245100.8-202ENST00000629247 1058 ntBASIC18.7■□□□□ 0.58
CRLF1O75462 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF1O75462 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CRLF1O75462 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.69■□□□□ 0.58
CRLF1O75462 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.69■□□□□ 0.58
CRLF1O75462 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CRLF1O75462 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CRLF1O75462 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CRLF1O75462 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF1O75462 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.68■□□□□ 0.58
CRLF1O75462 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF1O75462 AC123595.1-201ENST00000440769 1046 ntBASIC18.68■□□□□ 0.58
CRLF1O75462 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.68■□□□□ 0.58
CRLF1O75462 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.68■□□□□ 0.58
CRLF1O75462 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.68■□□□□ 0.58
CRLF1O75462 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CRLF1O75462 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CRLF1O75462 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRLF1O75462 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRLF1O75462 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.67■□□□□ 0.58
CRLF1O75462 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CRLF1O75462 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRLF1O75462 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.67■□□□□ 0.58
CRLF1O75462 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CRLF1O75462 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CRLF1O75462 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRLF1O75462 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRLF1O75462 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.66■□□□□ 0.58
CRLF1O75462 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.66■□□□□ 0.58
CRLF1O75462 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.66■□□□□ 0.58
CRLF1O75462 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.66■□□□□ 0.58
CRLF1O75462 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.66■□□□□ 0.58
CRLF1O75462 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.66■□□□□ 0.58
CRLF1O75462 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.66■□□□□ 0.58
CRLF1O75462 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRLF1O75462 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CRLF1O75462 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRLF1O75462 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.65■□□□□ 0.58
CRLF1O75462 AC009102.2-201ENST00000606772 1639 ntBASIC18.65■□□□□ 0.58
CRLF1O75462 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 AC027612.3-201ENST00000413684 1047 ntBASIC18.65■□□□□ 0.58
CRLF1O75462 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CRLF1O75462 AC126544.1-201ENST00000580842 1059 ntBASIC18.65■□□□□ 0.58
CRLF1O75462 AL358852.1-201ENST00000623174 1268 ntBASIC18.65■□□□□ 0.58
CRLF1O75462 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRLF1O75462 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CRLF1O75462 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CRLF1O75462 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CRLF1O75462 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CRLF1O75462 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRLF1O75462 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms