Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
PFDN1O60925 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 AC004812.2-201ENST00000611079 2094 ntBASIC20.67■□□□□ 0.9
PFDN1O60925 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PFDN1O60925 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PFDN1O60925 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.67■□□□□ 0.9
PFDN1O60925 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PFDN1O60925 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 AC142472.1-201ENST00000612013 1741 ntBASIC20.66■□□□□ 0.9
PFDN1O60925 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PFDN1O60925 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PFDN1O60925 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PFDN1O60925 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN1O60925 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN1O60925 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PFDN1O60925 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PFDN1O60925 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.64■□□□□ 0.9
PFDN1O60925 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PFDN1O60925 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PFDN1O60925 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PFDN1O60925 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PFDN1O60925 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.64■□□□□ 0.89
PFDN1O60925 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.64■□□□□ 0.89
PFDN1O60925 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PFDN1O60925 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PFDN1O60925 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PFDN1O60925 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN1O60925 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN1O60925 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.63■□□□□ 0.89
PFDN1O60925 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN1O60925 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN1O60925 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN1O60925 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.63■□□□□ 0.89
PFDN1O60925 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN1O60925 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN1O60925 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN1O60925 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN1O60925 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.62■□□□□ 0.89
PFDN1O60925 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN1O60925 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PFDN1O60925 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN1O60925 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PFDN1O60925 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN1O60925 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN1O60925 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PFDN1O60925 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PFDN1O60925 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.61■□□□□ 0.89
PFDN1O60925 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PFDN1O60925 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.61■□□□□ 0.89
PFDN1O60925 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN1O60925 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN1O60925 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN1O60925 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN1O60925 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN1O60925 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PFDN1O60925 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PFDN1O60925 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.6■□□□□ 0.89
PFDN1O60925 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.6■□□□□ 0.89
PFDN1O60925 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN1O60925 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN1O60925 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PFDN1O60925 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN1O60925 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN1O60925 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.59■□□□□ 0.89
PFDN1O60925 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PFDN1O60925 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.59■□□□□ 0.89
PFDN1O60925 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN1O60925 AC007952.6-201ENST00000573168 2673 ntBASIC20.59■□□□□ 0.89
PFDN1O60925 AC003957.1-201ENST00000625108 2673 ntBASIC20.59■□□□□ 0.89
PFDN1O60925 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN1O60925 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN1O60925 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN1O60925 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN1O60925 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN1O60925 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PFDN1O60925 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN1O60925 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN1O60925 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms