Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.72■■□□□ 1.07
RRP8O43159 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RRP8O43159 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RRP8O43159 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RRP8O43159 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RRP8O43159 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.71■■□□□ 1.07
RRP8O43159 KRT18P5-201ENST00000436075 1291 ntBASIC21.71■■□□□ 1.07
RRP8O43159 AC233992.3-201ENST00000607491 485 ntBASIC21.71■■□□□ 1.07
RRP8O43159 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.71■■□□□ 1.07
RRP8O43159 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RRP8O43159 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
RRP8O43159 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RRP8O43159 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RRP8O43159 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.7■■□□□ 1.06
RRP8O43159 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.7■■□□□ 1.06
RRP8O43159 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.7■■□□□ 1.06
RRP8O43159 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RRP8O43159 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RRP8O43159 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.7■■□□□ 1.06
RRP8O43159 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.7■■□□□ 1.06
RRP8O43159 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RRP8O43159 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.69■■□□□ 1.06
RRP8O43159 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.69■■□□□ 1.06
RRP8O43159 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RRP8O43159 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
RRP8O43159 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RRP8O43159 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RRP8O43159 YBX1P1-201ENST00000445822 960 ntBASIC21.68■■□□□ 1.06
RRP8O43159 AC136469.2-201ENST00000623944 1028 ntBASIC21.68■■□□□ 1.06
RRP8O43159 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.68■■□□□ 1.06
RRP8O43159 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RRP8O43159 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.68■■□□□ 1.06
RRP8O43159 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
RRP8O43159 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RRP8O43159 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.67■■□□□ 1.06
RRP8O43159 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.67■■□□□ 1.06
RRP8O43159 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RRP8O43159 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RRP8O43159 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.66■■□□□ 1.06
RRP8O43159 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RRP8O43159 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RRP8O43159 AC004911.1-201ENST00000416316 871 ntBASIC21.66■■□□□ 1.06
RRP8O43159 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.66■■□□□ 1.06
RRP8O43159 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.66■■□□□ 1.06
RRP8O43159 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.66■■□□□ 1.06
RRP8O43159 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RRP8O43159 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RRP8O43159 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RRP8O43159 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.66■■□□□ 1.06
RRP8O43159 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RRP8O43159 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RRP8O43159 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RRP8O43159 BX842568.3-201ENST00000418104 571 ntBASIC21.65■■□□□ 1.06
RRP8O43159 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.65■■□□□ 1.06
RRP8O43159 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RRP8O43159 AC241377.3-202ENST00000626088 1088 ntBASIC21.65■■□□□ 1.06
RRP8O43159 AC241585.3-202ENST00000628937 1088 ntBASIC21.65■■□□□ 1.06
RRP8O43159 AC245100.8-202ENST00000629247 1058 ntBASIC21.65■■□□□ 1.06
RRP8O43159 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RRP8O43159 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RRP8O43159 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RRP8O43159 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.65■■□□□ 1.06
RRP8O43159 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RRP8O43159 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RRP8O43159 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RRP8O43159 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RRP8O43159 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RRP8O43159 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RRP8O43159 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.64■■□□□ 1.05
RRP8O43159 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.64■■□□□ 1.05
RRP8O43159 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RRP8O43159 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.64■■□□□ 1.05
RRP8O43159 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RRP8O43159 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RRP8O43159 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RRP8O43159 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.64■■□□□ 1.05
RRP8O43159 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.63■■□□□ 1.05
RRP8O43159 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.63■■□□□ 1.05
RRP8O43159 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RRP8O43159 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms