Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPC1O15118 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.35■■□□□ 1.33
NPC1O15118 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.35■■□□□ 1.33
NPC1O15118 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPC1O15118 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.35■■□□□ 1.33
NPC1O15118 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPC1O15118 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NPC1O15118 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NPC1O15118 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NPC1O15118 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.34■■□□□ 1.33
NPC1O15118 AC092171.4-201ENST00000609130 632 ntBASIC23.34■■□□□ 1.33
NPC1O15118 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NPC1O15118 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPC1O15118 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NPC1O15118 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.34■■□□□ 1.33
NPC1O15118 AL161729.1-201ENST00000604104 1402 ntBASIC23.33■■□□□ 1.33
NPC1O15118 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NPC1O15118 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
NPC1O15118 MIR935-201ENST00000401179 91 ntBASIC23.33■■□□□ 1.33
NPC1O15118 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.33■■□□□ 1.33
NPC1O15118 PBX2P1-201ENST00000493219 1291 ntBASIC23.33■■□□□ 1.33
NPC1O15118 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NPC1O15118 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.33■■□□□ 1.33
NPC1O15118 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NPC1O15118 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NPC1O15118 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.33■■□□□ 1.32
NPC1O15118 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.33■■□□□ 1.32
NPC1O15118 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.32■■□□□ 1.32
NPC1O15118 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NPC1O15118 UNC93B3-201ENST00000308076 687 ntBASIC23.32■■□□□ 1.32
NPC1O15118 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.32■■□□□ 1.32
NPC1O15118 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NPC1O15118 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NPC1O15118 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPC1O15118 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
NPC1O15118 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPC1O15118 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
NPC1O15118 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NPC1O15118 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.31■■□□□ 1.32
NPC1O15118 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPC1O15118 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
NPC1O15118 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NPC1O15118 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NPC1O15118 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NPC1O15118 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NPC1O15118 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.3■■□□□ 1.32
NPC1O15118 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NPC1O15118 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.3■■□□□ 1.32
NPC1O15118 AC135279.3-201ENST00000610945 1311 ntBASIC23.3■■□□□ 1.32
NPC1O15118 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NPC1O15118 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.29■■□□□ 1.32
NPC1O15118 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPC1O15118 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.29■■□□□ 1.32
NPC1O15118 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
NPC1O15118 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.29■■□□□ 1.32
NPC1O15118 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.29■■□□□ 1.32
NPC1O15118 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPC1O15118 AL136162.1-201ENST00000607711 1078 ntBASIC23.29■■□□□ 1.32
NPC1O15118 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
NPC1O15118 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.28■■□□□ 1.32
NPC1O15118 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPC1O15118 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.28■■□□□ 1.32
NPC1O15118 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.28■■□□□ 1.32
NPC1O15118 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.28■■□□□ 1.32
NPC1O15118 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NPC1O15118 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPC1O15118 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPC1O15118 EDA-201ENST00000338901 1233 ntBASIC23.27■■□□□ 1.32
NPC1O15118 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NPC1O15118 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.27■■□□□ 1.32
NPC1O15118 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.27■■□□□ 1.32
NPC1O15118 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
NPC1O15118 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPC1O15118 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NPC1O15118 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPC1O15118 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NPC1O15118 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NPC1O15118 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NPC1O15118 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPC1O15118 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPC1O15118 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NPC1O15118 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.25■■□□□ 1.31
NPC1O15118 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NPC1O15118 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
NPC1O15118 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.24■■□□□ 1.31
NPC1O15118 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
NPC1O15118 AC142381.2-201ENST00000566120 298 ntBASIC23.24■■□□□ 1.31
NPC1O15118 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPC1O15118 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NPC1O15118 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NPC1O15118 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
NPC1O15118 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms