Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC7O00311 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CDC7O00311 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC7O00311 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
CDC7O00311 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CDC7O00311 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.58■■□□□ 1.21
CDC7O00311 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CDC7O00311 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.58■■□□□ 1.21
CDC7O00311 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDC7O00311 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC7O00311 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC7O00311 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC7O00311 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CDC7O00311 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC7O00311 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC7O00311 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC7O00311 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC7O00311 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC7O00311 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC7O00311 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC7O00311 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC7O00311 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC7O00311 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC7O00311 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC7O00311 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.56■■□□□ 1.2
CDC7O00311 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC7O00311 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC7O00311 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC7O00311 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC7O00311 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.55■■□□□ 1.2
CDC7O00311 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.55■■□□□ 1.2
CDC7O00311 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CDC7O00311 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDC7O00311 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC7O00311 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC7O00311 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CDC7O00311 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC7O00311 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC7O00311 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.54■■□□□ 1.2
CDC7O00311 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC7O00311 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC7O00311 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC7O00311 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC7O00311 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC7O00311 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC7O00311 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC7O00311 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC7O00311 AL022069.1-201ENST00000568025 1636 ntBASIC22.53■■□□□ 1.2
CDC7O00311 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDC7O00311 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC7O00311 AC131274.2-201ENST00000580697 1507 ntBASIC22.52■■□□□ 1.2
CDC7O00311 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC7O00311 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDC7O00311 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC7O00311 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC7O00311 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC7O00311 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC7O00311 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.52■■□□□ 1.2
CDC7O00311 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC7O00311 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC7O00311 AL161729.1-201ENST00000604104 1402 ntBASIC22.51■■□□□ 1.19
CDC7O00311 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC7O00311 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC7O00311 KRT18P24-201ENST00000344739 1156 ntBASIC22.51■■□□□ 1.19
CDC7O00311 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.51■■□□□ 1.19
CDC7O00311 THA1P-201ENST00000590384 1145 ntBASIC22.51■■□□□ 1.19
CDC7O00311 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC7O00311 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC7O00311 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CDC7O00311 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC7O00311 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC7O00311 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.5■■□□□ 1.19
CDC7O00311 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC7O00311 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC7O00311 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CDC7O00311 AC103834.1-201ENST00000520383 144 ntBASIC22.5■■□□□ 1.19
CDC7O00311 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.5■■□□□ 1.19
CDC7O00311 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC7O00311 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC7O00311 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC7O00311 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC7O00311 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.49■■□□□ 1.19
CDC7O00311 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.49■■□□□ 1.19
CDC7O00311 MIR4281-201ENST00000580852 62 ntBASIC22.49■■□□□ 1.19
CDC7O00311 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDC7O00311 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms