Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00473A8K010 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LINC00473A8K010 C9orf163-202ENST00000624034 2573 ntBASIC18.73■□□□□ 0.59
LINC00473A8K010 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00473A8K010 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
LINC00473A8K010 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC00473A8K010 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC00473A8K010 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LINC00473A8K010 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00473A8K010 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00473A8K010 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00473A8K010 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LINC00473A8K010 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00473A8K010 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LINC00473A8K010 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC00473A8K010 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00473A8K010 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00473A8K010 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00473A8K010 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00473A8K010 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00473A8K010 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LINC00473A8K010 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00473A8K010 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00473A8K010 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00473A8K010 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00473A8K010 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LINC00473A8K010 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LINC00473A8K010 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00473A8K010 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC00473A8K010 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00473A8K010 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LINC00473A8K010 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LINC00473A8K010 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC00473A8K010 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC00473A8K010 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00473A8K010 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00473A8K010 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00473A8K010 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LINC00473A8K010 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LINC00473A8K010 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LINC00473A8K010 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.68■□□□□ 0.58
LINC00473A8K010 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00473A8K010 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC00473A8K010 AL161729.1-201ENST00000604104 1402 ntBASIC18.67■□□□□ 0.58
LINC00473A8K010 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00473A8K010 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00473A8K010 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00473A8K010 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC00473A8K010 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.67■□□□□ 0.58
LINC00473A8K010 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00473A8K010 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.67■□□□□ 0.58
LINC00473A8K010 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00473A8K010 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00473A8K010 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.66■□□□□ 0.58
LINC00473A8K010 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.66■□□□□ 0.58
LINC00473A8K010 ABHD17AP5-201ENST00000580133 923 ntBASIC18.66■□□□□ 0.58
LINC00473A8K010 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
LINC00473A8K010 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
LINC00473A8K010 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00473A8K010 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC00473A8K010 DUX4L18-201ENST00000553347 1267 ntBASIC18.65■□□□□ 0.58
LINC00473A8K010 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.65■□□□□ 0.58
LINC00473A8K010 AC011551.1-201ENST00000614101 683 ntBASIC18.65■□□□□ 0.58
LINC00473A8K010 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LINC00473A8K010 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00473A8K010 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC00473A8K010 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.64■□□□□ 0.58
LINC00473A8K010 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms