Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 AL138724.1-201ENST00000606771 1088 ntBASIC23.5■■□□□ 1.35
SHISA7A6NL88 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SHISA7A6NL88 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
SHISA7A6NL88 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHISA7A6NL88 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
SHISA7A6NL88 IRS3P-201ENST00000223076 1006 ntBASIC23.49■■□□□ 1.35
SHISA7A6NL88 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.49■■□□□ 1.35
SHISA7A6NL88 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.49■■□□□ 1.35
SHISA7A6NL88 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.49■■□□□ 1.35
SHISA7A6NL88 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.49■■□□□ 1.35
SHISA7A6NL88 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SHISA7A6NL88 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHISA7A6NL88 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.48■■□□□ 1.35
SHISA7A6NL88 AC099791.1-201ENST00000416440 715 ntBASIC23.48■■□□□ 1.35
SHISA7A6NL88 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SHISA7A6NL88 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHISA7A6NL88 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.48■■□□□ 1.35
SHISA7A6NL88 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.48■■□□□ 1.35
SHISA7A6NL88 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.48■■□□□ 1.35
SHISA7A6NL88 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.48■■□□□ 1.35
SHISA7A6NL88 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHISA7A6NL88 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHISA7A6NL88 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHISA7A6NL88 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHISA7A6NL88 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SHISA7A6NL88 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SHISA7A6NL88 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.47■■□□□ 1.35
SHISA7A6NL88 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHISA7A6NL88 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SHISA7A6NL88 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SHISA7A6NL88 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SHISA7A6NL88 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SHISA7A6NL88 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SHISA7A6NL88 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.46■■□□□ 1.35
SHISA7A6NL88 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
SHISA7A6NL88 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SHISA7A6NL88 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.45■■□□□ 1.34
SHISA7A6NL88 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.45■■□□□ 1.34
SHISA7A6NL88 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
SHISA7A6NL88 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
SHISA7A6NL88 C17orf82-201ENST00000623772 1530 ntBASIC23.44■■□□□ 1.34
SHISA7A6NL88 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.44■■□□□ 1.34
SHISA7A6NL88 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.44■■□□□ 1.34
SHISA7A6NL88 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.43■■□□□ 1.34
SHISA7A6NL88 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.43■■□□□ 1.34
SHISA7A6NL88 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHISA7A6NL88 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHISA7A6NL88 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHISA7A6NL88 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.42■■□□□ 1.34
SHISA7A6NL88 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SHISA7A6NL88 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.42■■□□□ 1.34
SHISA7A6NL88 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SHISA7A6NL88 AC006455.2-201ENST00000429931 906 ntBASIC23.42■■□□□ 1.34
SHISA7A6NL88 AC136469.2-201ENST00000623944 1028 ntBASIC23.42■■□□□ 1.34
SHISA7A6NL88 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
SHISA7A6NL88 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHISA7A6NL88 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHISA7A6NL88 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHISA7A6NL88 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.41■■□□□ 1.34
SHISA7A6NL88 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHISA7A6NL88 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.41■■□□□ 1.34
SHISA7A6NL88 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
SHISA7A6NL88 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.41■■□□□ 1.34
SHISA7A6NL88 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHISA7A6NL88 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SHISA7A6NL88 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SHISA7A6NL88 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.4■■□□□ 1.34
SHISA7A6NL88 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SHISA7A6NL88 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.4■■□□□ 1.34
SHISA7A6NL88 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SHISA7A6NL88 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.39■■□□□ 1.33
SHISA7A6NL88 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SHISA7A6NL88 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.39■■□□□ 1.33
SHISA7A6NL88 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SHISA7A6NL88 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SHISA7A6NL88 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.38■■□□□ 1.33
SHISA7A6NL88 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SHISA7A6NL88 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.38■■□□□ 1.33
SHISA7A6NL88 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.38■■□□□ 1.33
SHISA7A6NL88 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.38■■□□□ 1.33
SHISA7A6NL88 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SHISA7A6NL88 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHISA7A6NL88 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SHISA7A6NL88 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SHISA7A6NL88 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms