Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PCP4L1A6NKN8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCP4L1A6NKN8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCP4L1A6NKN8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCP4L1A6NKN8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCP4L1A6NKN8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCP4L1A6NKN8 AC022211.4-201ENST00000625094 2161 ntBASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCP4L1A6NKN8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCP4L1A6NKN8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCP4L1A6NKN8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.15■□□□□ 0.5
PCP4L1A6NKN8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCP4L1A6NKN8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PCP4L1A6NKN8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
PCP4L1A6NKN8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCP4L1A6NKN8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
PCP4L1A6NKN8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCP4L1A6NKN8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCP4L1A6NKN8 AC127496.7-201ENST00000625110 1798 ntBASIC18.14■□□□□ 0.49
PCP4L1A6NKN8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCP4L1A6NKN8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCP4L1A6NKN8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.14■□□□□ 0.49
PCP4L1A6NKN8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 WHAMMP2-203ENST00000563942 1603 ntBASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 LINC00526-201ENST00000581067 1875 ntBASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCP4L1A6NKN8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 AC120498.9-201ENST00000339021 3867 ntBASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.12■□□□□ 0.49
PCP4L1A6NKN8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCP4L1A6NKN8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms