Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 AC010997.5-201ENST00000609182 354 ntBASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMIM9A6NGZ8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 AC131274.2-201ENST00000580697 1507 ntBASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMIM9A6NGZ8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 TSPY9P-201ENST00000440215 945 ntBASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 TSPY11P-201ENST00000442607 1045 ntBASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMIM9A6NGZ8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMIM9A6NGZ8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMIM9A6NGZ8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 KRT16P3-201ENST00000439127 1283 ntBASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMIM9A6NGZ8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMIM9A6NGZ8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 UNC93B8-201ENST00000511903 705 ntBASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SMIM9A6NGZ8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 LINC00543-201ENST00000567234 1845 ntBASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 MIR6724-1-201ENST00000616420 92 ntBASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 MIR6724-2-201ENST00000616483 92 ntBASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 MIR6724-4-201ENST00000617390 92 ntBASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 MIR6724-3-201ENST00000622482 92 ntBASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.55■□□□□ 0.24
SMIM9A6NGZ8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
SMIM9A6NGZ8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMIM9A6NGZ8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMIM9A6NGZ8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms