Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.71■■□□□ 1.39
TCAF2A6NFQ2 AL022069.1-201ENST00000568025 1636 ntBASIC23.7■■□□□ 1.39
TCAF2A6NFQ2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 AC131212.1-201ENST00000613771 668 ntBASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 MIR6722-201ENST00000617286 78 ntBASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.7■■□□□ 1.38
TCAF2A6NFQ2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCAF2A6NFQ2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 MIR6724-1-201ENST00000616420 92 ntBASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 MIR6724-2-201ENST00000616483 92 ntBASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 MIR6724-4-201ENST00000617390 92 ntBASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 MIR6724-3-201ENST00000622482 92 ntBASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TCAF2A6NFQ2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TCAF2A6NFQ2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCAF2A6NFQ2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCAF2A6NFQ2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TCAF2A6NFQ2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.66■■□□□ 1.38
TCAF2A6NFQ2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCAF2A6NFQ2 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.66■■□□□ 1.38
TCAF2A6NFQ2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.66■■□□□ 1.38
TCAF2A6NFQ2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.66■■□□□ 1.38
TCAF2A6NFQ2 AL161729.1-201ENST00000604104 1402 ntBASIC23.66■■□□□ 1.38
TCAF2A6NFQ2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCAF2A6NFQ2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.64■■□□□ 1.38
TCAF2A6NFQ2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.64■■□□□ 1.38
TCAF2A6NFQ2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.64■■□□□ 1.37
TCAF2A6NFQ2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.64■■□□□ 1.37
TCAF2A6NFQ2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TCAF2A6NFQ2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TCAF2A6NFQ2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TCAF2A6NFQ2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TCAF2A6NFQ2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TCAF2A6NFQ2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TCAF2A6NFQ2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TCAF2A6NFQ2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.61■■□□□ 1.37
TCAF2A6NFQ2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TCAF2A6NFQ2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TCAF2A6NFQ2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.6■■□□□ 1.37
TCAF2A6NFQ2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TCAF2A6NFQ2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TCAF2A6NFQ2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
TCAF2A6NFQ2 AL117332.1-201ENST00000622628 974 ntBASIC23.6■■□□□ 1.37
TCAF2A6NFQ2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TCAF2A6NFQ2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCAF2A6NFQ2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TCAF2A6NFQ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms