Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.14■□□□□ 0.81
SHISA3A0PJX4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
SHISA3A0PJX4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHISA3A0PJX4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHISA3A0PJX4 FOXO3B-201ENST00000395675 1928 ntBASIC20.14■□□□□ 0.81
SHISA3A0PJX4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHISA3A0PJX4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.12■□□□□ 0.81
SHISA3A0PJX4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.12■□□□□ 0.81
SHISA3A0PJX4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 MIR3960-201ENST00000583311 91 ntBASIC20.11■□□□□ 0.81
SHISA3A0PJX4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 CR559946.2-201ENST00000623684 991 ntBASIC20.11■□□□□ 0.81
SHISA3A0PJX4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.11■□□□□ 0.81
SHISA3A0PJX4 AC007375.3-201ENST00000600936 2314 ntBASIC20.1■□□□□ 0.81
SHISA3A0PJX4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.1■□□□□ 0.81
SHISA3A0PJX4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHISA3A0PJX4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.08■□□□□ 0.81
SHISA3A0PJX4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHISA3A0PJX4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHISA3A0PJX4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SHISA3A0PJX4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHISA3A0PJX4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SHISA3A0PJX4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.07■□□□□ 0.8
SHISA3A0PJX4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SHISA3A0PJX4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.06■□□□□ 0.8
SHISA3A0PJX4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms