Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV11-1A0A0K0K1C0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AL117332.1-201ENST00000622628 974 ntBASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV11-1A0A0K0K1C0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV11-1A0A0K0K1C0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.33■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRBV11-1A0A0K0K1C0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.33■■□□□ 1
TRBV11-1A0A0K0K1C0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TRBV11-1A0A0K0K1C0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRBV11-1A0A0K0K1C0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV11-1A0A0K0K1C0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 AL356740.2-201ENST00000601559 647 ntBASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 AC135731.1-201ENST00000569415 2548 ntBASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV11-1A0A0K0K1C0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 MIR3621-201ENST00000580529 85 ntBASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.3■■□□□ 1
TRBV11-1A0A0K0K1C0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV11-1A0A0K0K1C0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 AC008406.3-201ENST00000620001 1374 ntBASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.28■■□□□ 1
TRBV11-1A0A0K0K1C0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.27■■□□□ 1
TRBV11-1A0A0K0K1C0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV11-1A0A0K0K1C0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV11-1A0A0K0K1C0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.27■■□□□ 1
TRBV11-1A0A0K0K1C0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV11-1A0A0K0K1C0 AC005703.6-201ENST00000623265 1329 ntBASIC21.27■□□□□ 0.99
TRBV11-1A0A0K0K1C0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
TRBV11-1A0A0K0K1C0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 AL161729.1-201ENST00000604104 1402 ntBASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBV11-1A0A0K0K1C0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.25■□□□□ 0.99
TRBV11-1A0A0K0K1C0 AC131281.2-201ENST00000520478 145 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms