Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.79■■□□□ 1.24
TRBV5-4A0A0C4DH59 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 SNX5-217ENST00000606557 1087 ntBASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRBV5-4A0A0C4DH59 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRBV5-4A0A0C4DH59 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRBV5-4A0A0C4DH59 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRBV5-4A0A0C4DH59 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRBV5-4A0A0C4DH59 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.75■■□□□ 1.23
TRBV5-4A0A0C4DH59 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.75■■□□□ 1.23
TRBV5-4A0A0C4DH59 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRBV5-4A0A0C4DH59 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRBV5-4A0A0C4DH59 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 AL035685.1-201ENST00000636663 812 ntBASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRBV5-4A0A0C4DH59 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRBV5-4A0A0C4DH59 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 AC239859.2-201ENST00000444165 318 ntBASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 KRT125P-201ENST00000546827 989 ntBASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.72■■□□□ 1.23
TRBV5-4A0A0C4DH59 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 MIR4787-201ENST00000607364 84 ntBASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 AC092028.1-203ENST00000608262 953 ntBASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 ABCB10P4-201ENST00000566803 2184 ntBASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV5-4A0A0C4DH59 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRBV5-4A0A0C4DH59 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 ALDH1A3-203ENST00000557963 1670 ntBASIC22.7■■□□□ 1.22
TRBV5-4A0A0C4DH59 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRBV5-4A0A0C4DH59 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.68■■□□□ 1.22
TRBV5-4A0A0C4DH59 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms