Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV8-6A0A0B4J262 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 RNF126P1-201ENST00000567452 1320 ntBASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV8-6A0A0B4J262 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 AC025884.2-201ENST00000553429 711 ntBASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TRAV8-6A0A0B4J262 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV8-6A0A0B4J262 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV8-6A0A0B4J262 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 RP9P-202ENST00000450133 1212 ntBASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 HSD17B1P1-201ENST00000590052 955 ntBASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV8-6A0A0B4J262 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 EP400NL-214ENST00000641289 2402 ntBASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 AC007029.1-201ENST00000604183 313 ntBASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV8-6A0A0B4J262 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms