Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 KRT19P2-202ENST00000557173 1012 ntBASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP4S1Q9Y587 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AC090505.1-201ENST00000430515 1834 ntBASIC14.34□□□□□ -0.11
AP4S1Q9Y587 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AC098831.1-202ENST00000438821 336 ntBASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AC015910.1-201ENST00000579400 975 ntBASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AC068137.2-201ENST00000605408 478 ntBASIC14.34□□□□□ -0.11
AP4S1Q9Y587 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AKAP8P1-201ENST00000434743 1349 ntBASIC14.34□□□□□ -0.11
AP4S1Q9Y587 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP4S1Q9Y587 AGGF1P1-201ENST00000509500 2073 ntBASIC14.34□□□□□ -0.11
AP4S1Q9Y587 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP4S1Q9Y587 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
AP4S1Q9Y587 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AP4S1Q9Y587 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 HCG4P8-203ENST00000443049 980 ntBASIC14.33□□□□□ -0.12
AP4S1Q9Y587 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AP002472.1-201ENST00000577490 586 ntBASIC14.33□□□□□ -0.12
AP4S1Q9Y587 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AC099522.2-201ENST00000607001 744 ntBASIC14.33□□□□□ -0.12
AP4S1Q9Y587 AC148477.8-201ENST00000624298 468 ntBASIC14.33□□□□□ -0.12
AP4S1Q9Y587 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP4S1Q9Y587 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms