Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 BASP1P1-201ENST00000430708 665 ntBASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AC093214.1-201ENST00000511688 1107 ntBASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
POLR1DQ9Y2S0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC022144.1-201ENST00000602255 1580 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 FAM8A3P-201ENST00000427218 844 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC055876.3-201ENST00000431496 288 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 MEIS3P1-201ENST00000495167 958 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC138649.4-201ENST00000612222 287 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AL158212.4-201ENST00000624062 1286 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 FGD5P1-202ENST00000614866 2498 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AJ011931.1-201ENST00000618749 2492 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CICP23-201ENST00000605013 2741 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 AC073957.3-201ENST00000609998 6758 ntBASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
POLR1DQ9Y2S0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms